Lactuca sativa (garden lettuce): 111879384
Help
Entry
111879384 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111879384
KO
K14794
ribosomal RNA-processing protein 12
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111879384
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
90S particles
Other 90S particles
111879384
Pre-60S particles
Other pre-60S particles
111879384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
ParcG
Motif
Other DBs
NCBI-GeneID:
111879384
NCBI-ProteinID:
XP_023731594
LinkDB
All DBs
Position
9:33493155..33498590
Genome browser
AA seq
1123 aa
AA seq
DB search
MKKQRQQSTEESMEESTDATTSFTGESDICQQLLDRYGKSAASQHRHLCATAAATRSIIQ
SESLPLTPLSYFAATIDALSDTSKTTHDADAVSALSSFLAIVLPLVPEKSIATSKAAEAA
KIVVDLVDNPCEGLSVSSVRALVKCLGVLLDFCDLDDWKSVQLGFQTLMKYSIDKRPKVR
KCAQDCVVKVFKSFQSSLVKKSASKLFFKSFETYMSLAVETVSSRSTDGSKDDKFSKCEQ
LEALHMLNLLKFLVPCLPSKEISKTVVELQKSISAKFSPLTRHVFDVMEEILRLLEDEST
IPDTLEIVTTLASYISTKQNPVDTLFSAAALLENFLTKFQVGDANKWNSHYSLVIGSIAG
LLTSEATATKASNILKEMINRHIDLDILTDENNVESKESRIVKSLCDALLKILNTHKGTP
NEHTLAVISVLFLKLGKISHIYMEKILLKLASFMTLASENTSDVKHLQQCIGSAVVAIGP
DKLLAVLPISLDASDLTCSNTWLIPILKEYVNGSSLGFFIESIVPIAESFQEACQKVKKS
AIREQLQSQARGSWGLLPSFCCYPNDTYKKFGSLAKLLIPHIKKDAIMLEYIAIALQHLV
KQNRSFLGDNQGDDEASKLPKISYSKKIATKNIKALSSWSEGLLKAFTKVLFRVPFEKRA
FVKDTIKCLASISESSTIKAIFVSSLKRKEVDVSGDNAKDDKSSSKKNANKCLILELASS
VVGTASMDLIDLIYSFIKESLKEEDDHIQREAYATLYKILEESSEFRSSKFEELMDLLLG
LKSPVDITSLRWRFSCFKNLLIHSIEITSDGENTYGFRMLNEIIVTLKDSKEESRKVAYD
ILIGMSCTLQKTPSSLQKEKGPYYEFVTMIMGYLSGSSPHIKSGAVSALSLVIYNDSKIC
KLMPDLVPSILELLHSKAIEVIKAVLGFLKVLVLSLEGKDLASLLSDILSGLLPWSSVSR
HHFKSKVTVILEIMMRKCGSASVKSLVPEKYRDFVKDVLENREGKKNSQEGVTTKTDHES
SDTTPNSGEKRKPNEEYSRESGKRKREDKHSSSSYGARKFSRGGKDVDSSKKHFGHAKSM
DGKSQGTKRKTTTSFKNHTSSSSGAKKQKQWTRKGNKKNAPVT
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcaacggcaacaatcaaccgaagaatcaatggaagaatccaccgacgctact
acctcattcaccggtgaatctgatatatgccaacagctcctagaccgttacggcaaatcc
gccgcatctcaacaccgccacctctgcgcaactgctgcggctacccgctctatcatacaa
tccgaatctctgcccctcactcccctctcttacttcgctgccaccattgatgccctctcc
gatacctctaaaacaacccatgacgctgatgcagtctccgcgttgtcatcgtttttggca
attgtgctgcctctggttcccgagaagtctatagcgacgtccaaggcggctgaggctgcg
aagatcgtggttgacctggtggataatccttgtgagggtttgtcagtttcgagtgtgagg
gccttggtcaagtgtttgggggtgttgctagatttttgtgatttggacgattggaagtct
gttcaactaggtttccagacacttatgaagtattcgatagataaacgtccaaaggtcaga
aaatgtgctcaagattgtgtagtgaaagtcttcaagtctttccaatcttctcttgtcaag
aaaagtgcaagcaagctgttttttaaatcattcgaaacttatatgtcgttggcagttgaa
acagtttcttcaagatcaacagacgggtctaaagatgataaattttcaaaatgtgaacag
ttagaggctcttcacatgttaaatctgttgaaatttctggtcccttgtttaccaagcaaa
gaaatatcaaaaactgttgtagaattacaaaaatctataagtgcaaagttttcaccatta
acgaggcatgtttttgatgttatggaggaaatacttcgattattggaagatgaatctaca
attcctgataccttagaaatagtaacaacacttgcttcatatatatctacaaaacagaac
ccagtagacactcttttttctgcagcagctctacttgagaattttcttaccaaatttcaa
gttggagatgcaaacaaatggaatagccattactccttagtcattggttctatagcaggt
cttctgacatctgaggctacagctacaaaggcttcaaatattctaaaagaaatgataaac
cgtcatattgatctagatatcctcacagatgaaaataatgttgaatccaaggaatcaaga
atagttaaatccttatgtgatgcacttctaaaaattctgaatacccataaaggaactcca
aatgagcatactttggctgtcatttctgttttatttctcaaacttgggaagatttctcat
atttacatggagaaaatacttctaaagcttgccagttttatgacacttgcatctgaaaat
acttctgatgtaaagcatcttcaacagtgcatcgggtctgctgtagttgctataggacca
gataaactacttgcagtgttacctatctcccttgatgccagtgatctcacatgctcaaat
acttggttgataccaattttgaaggagtatgttaatggatcatctttggggttctttatt
gaaagtatagtgcctatagctgaatctttccaagaagcatgccaaaaagttaaaaagtca
gcaattagagaacaattgcagtcccaagcacgtggctcttggggtctattgccttccttc
tgctgctatccaaacgacacgtataaaaaatttggatccttggctaaacttctcattcca
cacatcaaaaaggatgcgattatgctcgagtatattgccattgcattgcagcatcttgtg
aagcagaataggagctttcttggtgataatcagggtgatgatgaagcttctaagcttcca
aagattagttactctaaaaaaattgcaaccaaaaacatcaaagctttgtcatcatggtca
gaggggttattgaaagcttttacaaaagttctttttagagtgccattcgagaagcgcgct
tttgtaaaggacaccattaaatgcttggcatctataagtgaatcttcaacaataaaagca
atttttgtttcatcacttaaaagaaaagaggtggatgtttctggagataatgcaaaagat
gataaatcctcttcaaagaaaaatgcaaataagtgtctgatacttgagctagcatcatct
gttgttgggacagctagcatggatctcattgatctcatatatagctttatcaaggagagt
ttgaaggaagaggatgaccacatccagagggaagcatatgccaccctttacaaaattttg
gaggaatcttcagagtttcgttcttcaaagtttgaggaacttatggatttgttacttggt
ttgaagtcccctgttgatattacttcacttagatggagattttcgtgcttcaagaacttg
ttaattcattctatcgagataacttctgatggagagaacacttatggttttcgtatgctg
aatgaaattatagtcacactaaaagattccaaggaagaaagtagaaaagtggcatatgac
attcttataggaatgagctgtaccttgcaaaaaacaccatcttcactccaaaaagaaaaa
ggaccttattatgaatttgtcaccatgataatggggtatctctctgggtcttctcctcac
ataaaaagtggtgcagtctctgcattatctttagtgatatataacgactccaaaatttgc
aagttgatgcccgatcttgtgccatccattctagaattgctgcatagtaaagccattgaa
gttataaaagctgttttaggtttcctcaaggtgttggttttgagccttgaagggaaagac
ttggcaagtcttctgtctgatatcctgagtggtcttctgccatggtcatctgtttctcgc
catcatttcaaatctaaagtgacagtgatcctggagatcatgatgagaaaatgtggttct
gcatcggtcaaatctcttgtacctgagaaataccgagatttcgttaaggatgttctggag
aatcgtgaaggaaagaaaaattcacaggaaggtgtgacaaccaaaacggatcacgaatca
tctgatacaactccaaacagtggggaaaagaggaagcctaatgaagaatattcaagagaa
agtggaaagaggaagagggaggataaacacagcagctcatcatatggggctcgtaagttt
tcacgaggaggaaaagatgttgatagtagtaagaaacattttggtcatgcaaaatctatg
gatggaaagtcacaaggcaccaaaaggaaaaccacaacttcatttaaaaatcatacttca
tcttcatcaggcgcaaagaaacagaaacagtggacaagaaaaggaaacaagaaaaatgca
cctgttacctga
DBGET
integrated database retrieval system
