Lactuca sativa (garden lettuce): 111879416
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Entry
111879416 CDS
T05352
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111879416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111879416
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
111879416
Prokaryotic type
Archaeal type
TFB
111879416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
HTH_Tnp_ISL3
RB_B
DUF7573
Motif
Other DBs
NCBI-GeneID:
111879416
NCBI-ProteinID:
XP_023731642
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All DBs
Position
9:34201467..34203793
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AA seq
312 aa
AA seq
DB search
MADAYCGDCKRNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNILLNDGGLSTVISKPNGGTSDFLSSSLGRWQNRGSNPDRTLILAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGASK
KEIGRAKEYIVKQLELEMGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVKKAEEF
DIRRSPISIAAAIIYIVTQLSDEKKPLKDVALATGVAEGTIRNSYKDLYPHLTKIIPTWY
AQEDDIKNLSSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcctactgcggcgactgcaagaggaacacggaggtggtgttcgatcattct
gccggcgataccgtttgttctgagtgtggactcgtccttgaatcccactcgatcgatgag
acctccgagtggcgtacctttgccaacgagtccggagataacgatcccgttcgtgtcggc
ggtcccaccaatatcctcctcaacgacggtggtttgtccaccgtgatttctaaacctaac
ggcggcaccagcgatttcctttcgtcttcgttgggacggtggcagaaccgaggttctaat
cccgatcgtacactcatcttggcgtttaaaacgatcgcgaccatgtctgataggttgggc
cttgttgcaacaataaaggatcgtgctaatgagatatacaaaaaggtggaagatcagaag
tcaagcagagggagaaatcaggatgccattttggctgcttgcctttacattgcttgtcgt
caagaagacaaaccacgaacagtaaaggaaatatgttcggttgccaatggagcctcaaag
aaagaaatcggtcgggcaaaagaatatattgtcaaacaactagagcttgagatgggtcaa
tctgttgaaatggggactattcatgctggtgatttcatgagacgattctgttcgaatctt
ggaatgaccaatcaaactgttaaagctgcccaagaatctgtaaagaaggcagaagagttt
gatataaggagaagcccgatatctatagctgcagctattatttacatagtaactcaactt
tcggatgagaaaaagcccctcaaagatgtagcacttgcaactggagttgcagaagggaca
atcagaaactcgtacaaggatttgtatcctcatttgacaaaaatcataccaacttggtat
gcacaagaagatgatattaagaacctatctagcccttaa
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integrated database retrieval system
