Lactuca sativa (garden lettuce): 111879420
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Entry
111879420 CDS
T05352
Name
(RefSeq) amino acid transporter AVT1A
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111879420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111879420
Transporters [BR:
lsv02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
111879420
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Motif
Pfam:
Aa_trans
CoxIIa
Spore_permease
Motif
Other DBs
NCBI-GeneID:
111879420
NCBI-ProteinID:
XP_023731644
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Position
9:complement(34477088..34481664)
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AA seq
534 aa
AA seq
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MAGKAKDTDYFAIEDDYDDNENDDIEANNSDDDDTDDASSRRSSFSQATGQWPQSYKYTL
DSYSISATPSVAFLRRPSGSIYSMYEPGIDSSTANFGDNIKSKLLIECSKVFSKEDVDRI
SRKISTWSGKGSLPDQLIDELPIAFGCSVTQTVFNSVNVMVGVGVLSMPNTIATAGWAGV
GILLLFAAICCYTAYLMKLCFESKETIQTYPDIGEAAFGKYGRLTIAIILYTSLYAYCVE
FIILEGDNLTSLFPGVSLQWGSVNTDPVHMFAVLSAVVMGSTLLVKNPRVISLFSATGVV
ATLMVIICVFWLGTVNVGFHERGPPIKLGGIAFALGIYGFCFSGHCVFPNIYQSMADKTK
FTKAMIICFILCLLMYGSVAIAGFLMFGEQSLSQITLNMPEDAVASKVALLTVIINPVTK
YALLMNPLASAIEELFPAKVARSNWCFITLRIALVASSVCIALSIPFFGLVMALMGSVLC
ILVSLILPSLCFLMISGSKATTTQIGLSICIMVLGIVCMVVGTYSSLADIANEL
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtaaagcgaaggacacagattatttcgcgatcgaagacgattatgatgacaac
gagaatgatgatatagaagcaaataacagtgatgatgatgacaccgatgatgcttccagt
cgtagatcgtcgttttctcaagctaccggtcaatggccacagagttacaagtatacactt
gattcgtactcaatttcagcaacaccaagtgtggcattccttagacgcccatcgggttct
atatattcaatgtatgaaccggggattgatagtagtaccgctaactttggtgataatata
aagtctaagttgctgatagaatgttcaaaggtttttagcaaagaggatgtagataggatt
tcaagaaagatatcaacatggtcaggaaagggttctttgcctgatcaactaatcgatgag
cttcccattgcctttggatgtagcgtcactcagactgttttcaattcggtgaatgtgatg
gttggagttggagttctttctatgccaaatacaatagctaccgctggctgggctggcgta
ggaatcctactcctttttgcagcaatatgttgctacacggcttatctcatgaaactttgc
ttcgagagtaaagaaaccattcaaacgtatcccgatattggagaagctgcatttgggaaa
tacggacgccttacaatagcaatcattttgtacacgtcactctatgcatattgtgtggag
ttcattatattggaaggagacaatctcaccagtttgttccctggtgtatcgctgcaatgg
ggtagcgtcaatacggacccggttcacatgtttgcagttctttctgctgtcgttatggga
tccacgcttttagtaaaaaacccccgagtgatctcattattttcagctactggtgttgtg
gctactcttatggtcatcatctgtgtattttggctgggtacagtgaacgtgggctttcat
gaaagaggtccacccataaagttgggtggcattgctttcgcacttggtatttatggattt
tgcttttctggacattgtgtgttcccaaatatataccagtcaatggcagataaaaccaag
tttaccaaggcaatgataatatgctttattttgtgtcttttgatgtatgggagtgttgca
attgcgggttttctcatgtttggagaacaatcgttgtcccagataacattgaacatgcct
gaggatgcagttgcttctaaagttgctttgttgactgtaattatcaatccggtcacgaag
tatgccctgttgatgaaccctttggcaagtgccatcgaagagctgtttcctgctaaagtt
gcacgtagcaattggtgttttattactctacggattgcacttgttgcatcctctgtctgc
attgcgttatctattcccttcttcggtcttgtgatggctttgatgggttcagtcttatgt
attttggtgtctctcatattgccatctctatgctttttgatgatcagtgggagtaaggcc
acgactacgcagattggtttgagcatttgtattatggtgttgggcatcgtttgcatggtc
gtgggaacgtactcatcattggcagatatagcaaatgaactctaa
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