Lactuca sativa (garden lettuce): 111879756
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Entry
111879756 CDS
T05352
Name
(RefSeq) vesicle transport v-SNARE 11
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111879756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111879756
Membrane trafficking [BR:
lsv04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
111879756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
RIFIN
Prominin
ETRAMP
DUF3792
DUF4332
Cauli_AT
DUF5713
DUF668
FapA
Motif
Other DBs
NCBI-GeneID:
111879756
NCBI-ProteinID:
XP_023731958
LinkDB
All DBs
Position
3:166557777..166561570
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AA seq
221 aa
AA seq
DB search
MSETFEGCERQYCELSASLSKKCTSATLLDGEQKKQKISEIKAGIDEAESLIRKMDTEAR
SLPPNVKAVLLAKLREYKSDLNNLKSEIKRIASSNLNQAARDELLESGMADATAVSADQR
GRLLTSTERLNKSSDRVRDSRRTMLETEELGVSLLQDLHQQRESLLRAHGTLHGVDENIS
KSKKIMTNISRRMGKNKWIIGSVVAILIIAIILILYFKLKK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacatttgaaggttgcgaacgccaatactgcgagctttcggcgagtttgtcg
aagaagtgtacatcagctactttactcgatggagagcaaaagaagcagaaaatttctgaa
ataaaagccggaatcgatgaagccgagtctctgatacgaaaaatggacacagaggcaaga
agcctaccaccaaatgtaaaagctgttcttttggcgaaattaagagaatacaaatcggat
ttgaataatttgaaaagtgaaattaaacgaattgcatcatccaatttaaatcaagctgcc
cgagatgaattattggaatcaggaatggcagatgcaactgcggtgtcagcagaccaaaga
ggaaggttattaacgtcaacagaaagattgaataagtcaagtgacagagttagggacagt
agaaggactatgcttgaaactgaagaactcggtgtttcacttctacaagatcttcatcaa
cagcgagagtctcttttacgtgcccatggaacccttcatggagttgatgagaacataagc
aagagtaaaaaaataatgacaaatatttcaagaagaatggggaaaaacaagtggataatt
ggctctgtggttgctattcttatcattgccatcatcttgattttgtacttcaagttgaag
aagtag
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