Lactuca sativa (garden lettuce): 111879958
Help
Entry
111879958 CDS
T05352
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111879958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111879958
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111879958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_2
AAA_16
AAA_14
AAA_22
AAA_28
RNA_helicase
AAA_33
TIP49
AAA_18
AAA_17
nSTAND3
Viral_helicase1
Rad17
NPHP3_N
NB-ARC
Mg_chelatase
IstB_IS21
ATPase_2
ABC_tran
NACHT
Parvo_NS1
nSTAND_NTPase5
Cytidylate_kin2
SKI
DUF5906
TsaE
Nucleolin_bd
AAA_7
Cytidylate_kin
AAA_11
AAA_29
DUF815
CPT
MCM
AAA_PrkA
CENP-X
Motif
Other DBs
NCBI-GeneID:
111879958
NCBI-ProteinID:
XP_023732153
LinkDB
All DBs
Position
4:66487789..66492059
Genome browser
AA seq
737 aa
AA seq
DB search
MREKGTSLLEDVLQVQETYGNAALSVDQLVHRLRANFSKYGRHKLRPFTRKVKQTLDSSN
ITGKKRRIELHESESSSSESQSDDGDEEDRRAVLTSEDDVYSLKLEPEFDLTKSRLRNTY
RKETKTVGSVKEYTYRRLKAQKRSNLSNDDGVDANGRHNDEPRFKDFGGMDDVINMLKKQ
VIIPLYHPELPRRHGVRPTVGILLHGPPGCGKSTLARAIANETGFPFYEVAASEMVSGIS
GASEENIRELFSKAYRTTPSIVFIDEIDAIASKRENHQTKMESRIVTQLLACMDQSHRGE
KQGYVLVIGATNRPDILDPALRRTGRFDREIALGVPDEKGRFQILKVLTRELRVSGDLDL
VKVSRATSGFVGADLEGLVTEAGSLAMARVIDERELELCKGSEKNERWWEKGWSVEELEK
LEGVRMLDFEVAIKNVVASSKREGFSMIPNVKWEDVGGLDTLRREFNRNIVGPIKFPDEF
DQKCGVDMEMGFLLYGPPGCGKTLIAQAVANESGANFIYVKGPELLSKYVGEAESAIRTI
FSRARTCSPCIVFFDEIDALTKNRGKEGGHVVQGVVTQLLVELDGVDQRKGVYVIGATNR
PEMVDKALLRPKRMEKLVYVPLPNPDERGLILKALARNKPIDADVDLIAIGQSEACANFS
GADLFALMKEAIMIVREERLNIKQAATATDEQESSLRGLPHTIKAIHFEQALGKISPSVS
DKQKQYFHRLSKTFGAS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaaaaggtacctctttgttggaggacgtcctacaggtacaagaaacctacggt
aatgcggctttatcagtcgaccaacttgtccaccgcctccgagccaatttttccaaatac
ggtcgtcacaagcttcgacctttcaccagaaaggtgaaacaaactctagattccagcaac
ataacaggaaagaaaagacgaattgagttacatgaatcagagtcttcatcctcggaatcg
caatcagatgatggagacgaagaagatagacgtgcagttttgacatctgaggatgatgta
tatagcctgaaattagaaccggagtttgatttaacaaagtcgagacttagaaacacgtac
agaaaagaaaccaaaacggttggttcagtgaaagaatatacatatagacgtcttaaggca
caaaaacggagcaacttatcaaatgatgatggtgttgatgcgaatggaagacacaatgat
gagccaaggtttaaggactttggtggaatggatgatgtgataaatatgttgaagaaacag
gtgattattcctttatatcatccagagttacctcgtaggcatggagttaggccaacggtt
ggcattttgttacatggtccaccagggtgtggaaagtcaacgctagctcgagccattgct
aacgagactggatttccattctatgaggttgcagccagtgagatggtctctggtatatca
ggtgcatcagaagagaacatacgagagctattttcaaaagcatacagaacaacaccatct
atagttttcatcgatgaaatcgatgcaatcgcttcaaaaagagaaaatcatcaaacgaaa
atggaaagccggattgtgacacaattattggcatgcatggatcaatcccacagaggtgaa
aaacaaggatacgtcttagtaattggtgctactaacagacctgatattcttgacccagca
ttaagaaggaccggaaggtttgatcgtgagattgctttaggtgttccagatgaaaaagga
agattccagattcttaaagttcttacacgtgaattgagagtgtcaggtgatcttgatcta
gtgaaagtttctagggcgacttcagggtttgtaggtgctgatttggaaggactggtgact
gaagctgggagtcttgcaatggcaagagtcatagatgaaagagagttggaactttgtaaa
ggaagtgagaaaaatgaacgttggtgggagaaagggtggtctgttgaggaattagagaaa
cttgaaggcgtgagaatgttggattttgaggtagcaataaaaaatgttgtcgcgtcttcc
aaaagagaagggttttctatgattccaaatgttaaatgggaagatgttggaggtcttgat
actttgagaagggagtttaatcgtaatatagttgggcctataaaatttcctgatgagttt
gatcagaaatgtggagttgatatggagatggggtttttgctatatggaccacctggttgt
gggaaaacattaattgcccaagctgttgctaatgaatcaggagcaaatttcatatacgtt
aagggtcctgagcttttgagcaaatatgttggtgaggctgaatcggcaattcgaacaata
ttcagtcgtgctaggacgtgttccccatgcatagtgttcttcgatgagatagatgctctg
acaaaaaaccgtggaaaagaagggggacacgtggttcagggagttgtgactcagcttttg
gtagagctagatggtgttgaccaacgaaagggtgtttatgtaattggtgctacaaatagg
cctgagatggtggacaaggcacttttaagacccaaaagaatggagaaacttgtgtatgtg
cctctgccaaatccagatgaacgtgggttgatcttgaaagctcttgctaggaataagcca
atagatgctgacgtggacttgattgctattggtcagagtgaggcttgtgcaaattttagt
ggagccgatctttttgcattgatgaaagaagctatcatgattgttcgtgaagagagatta
aacataaagcaagctgcaacagctactgatgaacaagaaagctcattacgtgggttgcca
catactattaaagctatacattttgagcaagctttgggaaaaatctccccttctgtctca
gataagcaaaaacagtatttccatcgactatcaaagacgtttggagcatcgtaa
DBGET
integrated database retrieval system
