Lactuca sativa (garden lettuce): 111879963
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Entry
111879963 CDS
T05352
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111879963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111879963
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111879963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_2
TIP49
AAA_16
AAA_14
AAA_22
RNA_helicase
IstB_IS21
AAA_28
AAA_17
AAA_33
AAA_18
nSTAND3
NPHP3_N
Viral_helicase1
Rad17
Bac_DnaA
AAA_3
Mg_chelatase
Nucleolin_bd
Parvo_NS1
Cytidylate_kin2
NACHT
ATPase_2
ABC_tran
TsaE
NB-ARC
AAA_19
AAA_11
Motif
Other DBs
NCBI-GeneID:
111879963
NCBI-ProteinID:
XP_023732156
LinkDB
All DBs
Position
4:66536317..66540197
Genome browser
AA seq
835 aa
AA seq
DB search
MTRKGSRPPVKSSLFERVLRRRVQETYGNATPSVGELVDRLRANFPEYGRHKIQPFTRMV
TQTLDSNDSKGKQKSTRKNDDYNSKFNYDDEDDSTSPSLRSPVSKKAKKIDSREQRLQML
ETKHVAQRRVKLQSESSSSESESDDGEEDRSAVSSSEDDVYSLQFDPEFDITKSMLRNKY
SGSKLDGKVDGKPQNIELEVVTNSNNKETRKVDLMKEDRGGKLKAKARKPNNSSNEDADA
NGKEDGPRFKDLGGMDVVLDELKMEVIVPLFHPELPRRLGVRPMAGILLHGPPGCGKTKL
AHAIANETGVPFYKISATELVSGISGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRE
NLQREMERRIVTQLMTCMDESHRVTKPDDTSKNLEPSNNKPGYVLVIGATNRPDAVDPAL
RRPGRFDREISLGVPDENARIKILEVLTRDLKREDAFDLVKIARATPGFVGADLAALVNK
AGNLAMKRIIDGRKSELSKENEEENEDWWRKEWTDEEMEKLCITMLDFEVAAKQVQPSSR
REGFSSIPNVKWEDVGGLDILRREFDRYIVRRIKYPDEYEEYGVDLETGFLLYGPPGCGK
TLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTIFSRARTCSPCILFFDEIDALTT
KRGKEGGWVVERLLNQLLIELDGADQRKGVYVIGATNRPEVMDRAVLRPGRFGKLMYVPL
PSADERGLILKAVSRRKPLDADVDLIAIGRSEACANLSGADLSSLMNEAAMAAVEEKFKK
IEAAKASDEPQSSLGGLPHTIKAIHFEQALGKISPSVSDKQKQYYHLLSQSFNAS
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggaaaggaagtaggccgccggtgaagtcgtcactgttcgagagagtcctacgc
cgccgggtacaagaaacctacggtaacgccactccatctgttggcgaacttgtcgaccgc
ctccgcgccaattttcccgaatacggccgccacaagatacaacctttcaccagaatggtg
acacaaaccctagattccaacgacagcaaaggaaagcagaaatcaaccagaaagaatgac
gattacaattctaaattcaattacgacgatgaagatgatagcacgtctccatcgttacgc
agccctgtaagcaagaaagcaaagaaaattgatagtagagagcagagacttcagatgctt
gagacgaagcacgttgcacaaagacgagttaagctgcaatcagagtcatcatcctcggaa
tcggaatcggatgacggagaagaagatagaagtgccgtttcctcgtctgaagatgatgtc
tatagcctgcaatttgacccggagtttgatataacgaagtctatgctccgaaacaagtac
agcgggtcaaaacttgatggaaaagtcgacgggaaacctcaaaatattgagttagaagtc
gttacgaatagcaacaacaaggagactagaaaggttgatttgatgaaggaagatcgaggt
ggtaagttaaaagcaaaggcacgaaaaccgaacaactcatcaaacgaagatgctgatgct
aatgggaaagaagatgggccaaggtttaaggaccttggaggtatggatgttgtgttggat
gaattgaagatggaggtgattgttcctttattccatccagagttacctcgaaggcttgga
gttaggccgatggctggcattttgttacatgggccaccagggtgtggaaagactaaacta
gctcacgccattgctaatgaaactggagttccattctataagatttcagccactgagttg
gtatctggtatatcaggtgcatcagaggaaaacatacgagagctattttcaaaagcatac
agaacagcaccttccatagttttcatcgatgaaatcgatgcaatcgcttcaaaaagagaa
aatctccaaagagaaatggaacgcaggatagtgacacaattaatgacatgcatggatgaa
tcccacagagtcacaaaaccagatgacacctcaaagaatctagaaccttccaataacaaa
ccagggtacgtcttagtaatcggtgccaccaacagacccgacgctgtggaccccgcgtta
agaaggcctggaagattcgaccgtgagatcagtctaggtgtccctgatgaaaatgcaaga
atcaagattcttgaagttcttacacgtgatttgaaacgtgaagatgcttttgatcttgtg
aaaattgctagggcaactccaggttttgttggtgctgatctggcagctttggtgaataaa
gctggtaatcttgctatgaagagaatcatagatggaagaaaatcggagctttctaaagaa
aatgaagaagaaaatgaagattggtggaggaaggagtggactgatgaggaaatggagaaa
ctttgtataacaatgttggattttgaggtagctgctaaacaggttcaaccttcttctaga
agagaagggttttctagcattccaaatgttaaatgggaagatgttggaggtcttgatatt
ttgagaagggagtttgatcgttatatagttagacgtattaaatatcctgatgagtatgag
gaatatggagttgatttggagactgggtttttgctatatggaccacctggttgtggaaaa
acgttaattgccaaagctgttgctaatgaagcaggagcaaatttcatacacattaagggt
cctgagcttttgaacaaatatgttggggagagtgaattggcagttaggacaatatttagt
cgtgcaaggacttgttctccatgcatactgttctttgatgagatagatgctctgacaaca
aagcgtggaaaggaagggggatgggttgttgagcgacttctgaatcagctattgatagag
ctagatggtgctgaccaacgcaagggcgtttacgtaattggtgccaccaacaggcccgag
gtgatggatagagcagtgttaaggccaggaagatttgggaaacttatgtatgtgcctctg
ccaagtgcagatgaacgtgggttgatcttaaaagctgtttctagaaggaaaccactagat
gctgacgtggacttgattgctattggtcgaagtgaggcttgtgcaaatttaagtggagct
gatctttcctcattgatgaacgaagctgccatggctgcagttgaagagaaattcaagaaa
atcgaagctgcaaaagctagtgatgaaccacaaagctcattaggtggcttgccacatact
attaaagccatacattttgagcaagcattgggaaaaatctcaccttctgtctcagataag
caaaaacagtattaccatctactatcacagagcttcaacgcatcttaa
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