Lactuca sativa (garden lettuce): 111880165
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Entry
111880165 CDS
T05352
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111880165
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111880165
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
111880165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-RING_16
zf-ANAPC11
zf-C3HC4_3
zinc_ribbon_16
Arc
Prok-RING_4
zf-Nse
RINGv
zf_RING_Vps8
zf-RING-like
PHD
PHD_NSD
Baculo_RING
SLX1_C
Motif
Other DBs
NCBI-GeneID:
111880165
NCBI-ProteinID:
XP_023732334
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All DBs
Position
5:96315229..96316733
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AA seq
394 aa
AA seq
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MGSDHNKSSCYSDLLIPPFLVLFALQFVPYVGAQASAPPDGMPYADFNPSIITIIVILVA
ALFLMGCFSIYIRRRSNEGGGIIRRVSIRRAAVPSRGLDSTVIETFPTFVYSSVKGLKIG
KGALECAVCLNEYEDEETLRLIPKCDHVFHPECIDAWFENHVTCPVCRANLVPDSGESGN
VPAEVELAVSGDEHHRTTAAGEENDGVSGSGSVSISIAEDPVVNIQEPATHTESLNRNQS
GKQNRPQIFPRLFDKFRSHSTGHSLVQPGENLDRFTLRLPEDVRKQVVNRALLNRMGSTV
RMTGEGSEKKGFRTAGVGSGRRKSYRRLESLDRVVVRSERWVLSRAPSFLTRAFSIRSPR
VVSGDGEASTSATTPKGSKSGDKIPLNNFGPKSC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggttccgaccacaacaagagtagctgctatagtgatttactgattccaccatttctg
gtactctttgcgctgcaattcgtaccttatgtcggagctcaagcttcagctcccccagat
gggatgccgtatgctgatttcaacccttcgattatcaccataatcgtaatccttgttgca
gctctcttcttaatggggtgtttctcgatttacatccggcggcgctcaaacgaaggcggt
ggtattatccgtagagtctccatacgccgtgctgcggtgccatcacgcggtctcgattcc
acggtgatcgagacgtttccgaccttcgtttactcctccgtgaaggggcttaagattggg
aagggagcacttgagtgcgccgtgtgtctcaatgaatacgaagatgaagaaactctccgg
ttgattccgaagtgcgatcatgttttccatcccgagtgtattgacgcttggttcgagaat
cacgtcacttgccctgtctgccgtgcgaatctcgttcctgattccggcgagtccggtaac
gttcccgcagaggtggagttagctgtttcaggcgatgaacatcaccggaccaccgcagct
ggggaagaaaatgacggcgtttctggttctggttccgtttccatttccattgctgaagat
cctgtagtcaacatacaagagccggcgacgcatactgagtcgctgaaccggaaccagagt
ggaaagcagaatcggccacagatattcccgaggttgttcgacaagtttagatctcattcg
accggacactcgctggttcaaccgggggagaatctagaccggtttacgttgcggttgccg
gaagacgtgaggaagcaagtcgtgaatcgagctctgctaaaccggatgggaagcactgtg
aggatgaccggagaagggagtgaaaagaaagggttcaggacggccggagtaggtagcggc
cggagaaaatcttacagacggctggagagtttagaccgggtggtggtgaggtcagaacgg
tgggttttgtcgagggcaccatcttttttgactcgagcattctccattaggtctccgagg
gttgtctccggcgacggcgaggcatcaacgtcggcgacgacgccgaaaggctccaaatcg
ggcgataaaattccactaaataactttggacccaaaagttgttga
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