Lactuca sativa (garden lettuce): 111880176
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Entry
111880176 CDS
T05352
Name
(RefSeq) two-component response regulator ARR12
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111880176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111880176
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
111880176
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
KaiA_N
Motif
Other DBs
NCBI-GeneID:
111880176
NCBI-ProteinID:
XP_023732347
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Position
5:96495498..96497968
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AA seq
409 aa
AA seq
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MGVEPKSANESDEFPVGMRVLAVDDDPACLKILEALLRKCQYHVTTTNQAVLALQMLREN
KEKFDLVISDVCMPDMDGFKLLEHVGLEMDLPVIMLSSYGDTKHVTKGIYHGACDYLLKP
VRIEELKLIWQHVIRRKIGKNRLDEVENVFSDKNEKPNKRRKDSSAQKKPRLSWTKDLHN
KFVAAVKHLGVDKAIPTSILKVMNVENLTKQNVASHLQKYRGYLKRISHEENQKGNMVIS
PNRRLDFAYLPTFIGYENQSLGTNSYPPNNLIGESSTPSGMGIFGISSLPMIQENDSQKL
ATTINLQEAPNVVDESILYPVTQNALGNLVCPIQSSCYVSNDGFTPMGNNVEGMIPPYST
TYDGGVGSLEDIAAAMMREEKGKGKVIVEGHSGYYDEVCYATSENYIYT
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggaaccgaaatctgcaaatgagtcggatgaatttccagtgggcatgcgagtt
ttggctgtggatgatgatcccgcttgccttaagatcttggaagccctccttcgtaaatgc
caatatcatgtgacaactacaaatcaagcggttttggccttacagatgctaagagaaaat
aaagaaaagttcgatttggttattagtgatgtttgcatgcctgatatggatggttttaag
cttcttgaacatgtggggcttgagatggatcttcctgtcataatgttatcttcatatgga
gacacaaaacatgtgacaaaaggaatatatcatggagcttgtgattatttgctcaaaccc
gttagaattgaagagctaaagcttatttggcaacatgtgattagaagaaagattgggaaa
aatcgccttgatgaggtggaaaatgtattttcagacaaaaatgaaaaaccaaacaaaaga
agaaaagattcatcagcacaaaaaaagcctcgcctttcttggactaaagatctacataac
aaatttgttgcagctgtaaagcatttgggcgttgacaaggctattccaacaagcattcta
aaagtgatgaatgtggaaaatctcactaaacaaaacgttgctagtcaccttcagaaatac
cgtggttacttaaaaaggattagccacgaggaaaatcagaagggtaatatggtaatttca
ccaaacagaaggttggattttgcttatcttcctacttttatcggttatgagaatcaatct
ttaggaacaaattcatatccaccaaacaacttaattggtgaatcaagtactccttctggt
atgggtatttttggtatttcatctttaccgatgattcaagaaaatgatagtcaaaagtta
gcaaccaccataaaccttcaagaagcaccgaatgttgttgatgagtcaattttatacccc
gttacccaaaatgcccttggaaacttggtgtgtccgatccaatcaagttgttatgtttca
aatgacggttttacccctatggggaataacgttgaaggtatgataccgccatatagtaca
acatatgatggcggtgttggctccttggaagatatagcggctgcgatgatgcgagaggag
aaaggcaagggtaaggtgattgtggaagggcattctgggtattatgatgaagtttgctat
gctactagtgaaaattacatctatacgtga
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