Lactuca sativa (garden lettuce): 111880179
Help
Entry
111880179 CDS
T05352
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23 isoform X2
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111880179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111880179
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
111880179
Ubiquitin system [BR:
lsv04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
111880179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
UQ_con
SH3-B_UBE2O
SH3-C_UBE2O
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
111880179
NCBI-ProteinID:
XP_023732352
LinkDB
All DBs
Position
5:complement(96475564..96481320)
Genome browser
AA seq
1051 aa
AA seq
DB search
MESKLDCDTDHGHDHDPNEASMVKIEENGRRPGVYIYRQDVVKSKTDGKTGVVTEVAGDS
DSDSSSDDEDEDEDNEVVGPKEDLRENITGNNTDNDDEEEEEEGEEENTPLPADHVRVLW
MDESESTHSQNDVIVIDRGFLHGDYVASASDPTGQVGVVIDVNISVDLSTIDGCVINDVS
SKNLKRVRDFQVGDYVIFGPWLGRIDDVLDNVTVMFDDGSVCKVMKADPLRLKPVGKNLL
EDAHYPYYPGQRVKASSSSVFKNSRWVSGLWKASRLEGTVTNVTAGSVFVYWIASAGYGP
DSSITPSEEQNPKNLKLLACFSHANWELGDWCLLPSPKDSVKGRLQGQEKSESDSEVQEN
TGIGITNSNPSTESSSCSGSLPVSKGSSSGTHESWPLHRKKVRKVMVKRDKRCKKKEENY
EKALQIVNTKTRVDVLWQDGSTKHGLDSTSLIPIENPGDHEFVSEQYVVEKPSDGNDAAD
DDHDDEVSRVGVVKSVNAKERTACVRWLKSVARAEDFKEFDKEEVVSVYELEGHQDYDYC
YGDVVVRLPSADVAGLTDGNEVKGDFSDLSWVGNITGLRNGDIEVTWADGMVSMVGPQAI
YVVGRDDDDDSAGGGSEVSDDAASWETMEGEDNDMENLQKALEDLGMQNGSQDTDEQTAE
SIQTNGALSIPLAALGFMTRLASGIFSRGQRNITDNSGGDNVTLHREDKNDDVSSSRKSS
STDNTLERLASGSEEHEHEHADVEEKFLLDSPAQRLNIDDSGKSSEGGNGNSSFKGFDIV
KDPLDHYYLGVNGQNITGRKWLKKVQQDWNILQNNLPNGIYVRCYENRMDLLRAVVVGAY
GTPYQDGLFFFDFHLPPEYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWSGKGNEV
WDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQVGTPEGEKNSLSYNENTFLLNCKTIM
YLIRRPPKDFEDLVREHFRERGYYILKACDAYMKGYLIGSLSEDASVCETSIPDANSVGF
KLMLAKIVPKLLLALNQIGANCQEFIHLQDS
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggaatccaagctggattgtgatacggatcatggtcatgatcatgatccaaacgaagct
tccatggtcaagatagaagagaatggaaggcgtccaggggtatatatctacagacaagat
gttgtaaagagcaaaactgatggaaagacaggtgtagtgacagaagttgcaggtgattct
gattcagatagcagtagtgatgatgaagatgaagatgaagacaatgaagtggtgggcccc
aaagaagatttacgtgaaaacatcactggaaataatactgataatgatgatgaagaagaa
gaagaagaaggagaagaagaaaacaccccacttccagcagaccatgttagggttctatgg
atggatgagtcagagtcaacccatagtcaaaatgatgtgatagtaatcgacagaggtttt
ttacatggagattatgttgcttctgcttctgatccaactgggcaagtgggtgttgttatt
gatgtcaatatatccgttgacttgtcaaccattgatgggtgtgtcataaatgatgtctct
tcaaagaatctgaaacgtgtaagggattttcaagtgggcgattatgtaatttttggtcca
tggttgggcagaatcgatgatgttcttgataatgtaacagtcatgtttgatgatggatca
gtttgtaaagttatgaaagctgatcctttaaggttaaaacctgttggcaagaatcttcta
gaagatgcacattacccatattaccctggtcaaagagtcaaagcaagttcttcatctgtt
ttcaagaattcaagatgggtatctgggttgtggaaagcttcaagattggaaggaactgta
acaaatgtgacagctggatccgtttttgtttattggattgcatccgcgggttatggcccg
gattcttcaattacaccttctgaagaacaaaaccctaaaaacttaaagttattggcatgt
ttttcacatgcaaattgggaacttggtgattggtgtcttcttccatctccaaaagactct
gtaaaaggtagattacaaggtcaagagaagtccgagagtgattccgaagtgcaagaaaac
actggaatcggaatcaccaattccaatccttctactgaatctagttcttgtagtggttca
ttgcctgtttcaaaaggttcgagttctgggactcatgaatcttggcctttacataggaaa
aaggtaagaaaagttatggtgaagagggataaaaggtgtaagaaaaaagaggaaaattac
gaaaaagcccttcaaattgtgaacacgaaaacacgagttgatgtactttggcaagacggg
agtacaaaacacggattggattccacttctttgattccaattgaaaaccctggagatcat
gaatttgtttctgaacaatatgttgtggaaaaacctagtgatgggaatgatgctgctgat
gatgatcatgatgatgaagttagtcgtgttggagttgtgaaaagtgtgaatgcaaaagaa
agaactgcatgtgtaaggtggttgaaatcggttgcaagagcagaagattttaaggaattt
gataaagaggaagttgtgagtgtgtatgagcttgaagggcatcaagattatgattattgt
tatggggatgtggttgtgaggttaccatctgctgacgtggcagggttgaccgatgggaat
gaggtcaaaggagatttttcggatctttcttgggttggaaacattacagggcttagaaat
ggtgatattgaagttacttgggctgatgggatggtttcaatggtgggcccacaagcaata
tatgtagtagggcgtgatgatgatgatgactcagctggtggtggaagtgaagtaagtgat
gatgcagcaagttgggaaacaatggagggtgaagataatgatatggaaaatcttcaaaag
gcactagaggatcttgggatgcaaaatgggtcacaggatacagatgagcaaacagctgaa
agcattcagacaaatggtgcgctttctatacccttagctgcccttggattcatgacaagg
ttagcaagtggaattttttctaggggtcaaagaaacattacagataattcagggggtgat
aatgtaacattacatagggaagataaaaatgatgatgtgtctagttcacgaaaatccagc
tctactgataatacccttgaaagattggcttctggtagtgaggagcatgaacatgaacat
gctgatgtggaggaaaagtttttattagattcgccagctcagcgattaaatattgatgat
tctggtaaatcaagtgagggggggaatggaaattccagctttaaaggatttgatattgtg
aaagatcctcttgatcattattatcttggtgtcaatggacagaatatcaccggaagaaaa
tggctgaagaaagtccaacaagattggaatatccttcaaaacaacttaccaaatggaatt
tatgtcagatgttatgaaaatagaatggatttattgagagctgtagtagttggagcatat
ggaacaccttatcaagatggccttttcttttttgactttcatctcccccctgaatacccc
gatgttcctccgtcagcatattatcattcgggaggatggagaataaaccctaatttatac
gaggaaggaaaagtttgtcttagcctgttaaatacatggagtggaaaagggaatgaagtt
tgggatccaaaatcttccagcattcttcaagttctggtttcactacaaggccttgtgctt
aattccaaaccctattttaatgaagctggatatgataaacaagttgggactccagaagga
gagaagaattctttgtcatataatgagaataccttcttattgaactgcaaaacaatcatg
tatctcatcagaagacccccaaaggattttgaagatcttgtgagggagcattttagagag
cgtgggtattatattctcaaggcatgtgatgcgtacatgaaaggctatttaattggctct
ctttctgaagatgcctctgtatgtgaaaccagtattccggatgctaattctgttgggttc
aagctcatgttagcaaaaattgtgccaaagcttttgttagccctcaatcaaatcggagct
aattgtcaagagttcattcatttacaagactcgtaa
DBGET
integrated database retrieval system
