Lactuca sativa (garden lettuce): 111880187
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Entry
111880187 CDS
T05352
Name
(RefSeq) vesicle transport v-SNARE 12
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111880187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111880187
Membrane trafficking [BR:
lsv04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
111880187
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
PLU-1
MRP-S26
YqjK
DUF3792
DASH_Spc19
FUSC
ETRAMP
Motif
Other DBs
NCBI-GeneID:
111880187
NCBI-ProteinID:
XP_023732363
LinkDB
All DBs
Position
4:complement(18927969..18929713)
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AA seq
217 aa
AA seq
DB search
MSEVFEGYERQYCELSANLSRKCNAAGSILDGEQKSKEINELLSGLDEADVLIRKMDLEA
RSLQPSVKAMLLAKLREYKSDLTKLKREVKKLASAKSSLTAHEELLESGMASSDQRDRLM
MSTERLNQSSERIKDSRRAVFETEELGVSILQDLHQQRESLLNSHAKLHGVDDAIDKSKK
VLTAMSRRISKNKWILGSVIGALVLAIIFILYFKLTH
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtattcgaaggctacgagcgacagtattgtgagctgtctgcgaatttgtcc
agaaaatgtaacgcagctggttctattcttgatggagagcaaaaaagcaaagagatcaat
gaactactatctggattagatgaagctgatgttctgataagaaaaatggatcttgaagca
agaagtttgcaaccaagtgtgaaggcaatgctgcttgcaaagcttcgagaatacaaatct
gatttaacaaaactgaaaagggaagttaagaaacttgcttcagctaaatccagtctaact
gcacatgaagagttgctggagtccggaatggcttcttcagatcaaagagatagactgatg
atgtcaactgagaggctaaatcaatctagtgagagaattaaggatagcaggagagctgtg
tttgaaacagaagaacttggtgtctcaattcttcaagatttgcatcaacaacgagaaagt
cttctaaattcccatgcaaagctgcatggagtagatgatgcgattgacaagagtaagaaa
gtgttgacagcaatgtcaagaaggatatcaaagaacaagtggatacttgggtctgtgatt
ggagctcttgtgcttgccattatttttattttatatttcaagcttactcattag
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