Lactuca sativa (garden lettuce): 111880188
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Entry
111880188 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111880188
KO
K20285
Rab9 effector protein with kelch motifs
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111880188
Membrane trafficking [BR:
lsv04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111880188
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_5
Kelch_1
Kelch_6
Kelch_2
NANM
Hyd_WA
DUF7588
Motif
Other DBs
NCBI-GeneID:
111880188
NCBI-ProteinID:
XP_023732362
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All DBs
Position
5:97067203..97071275
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AA seq
612 aa
AA seq
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MGSLGNGDVKKATWLHPRFTGFNPSERWGHSACFSNGFLYIFGGCCGGLHFSDVLLLNLE
TMAWTNLATKGVGPGPRDSHSAVIVGHMMVIFGGTNGCRKVNDVHILDLQTREWTRPDCK
GVAPTPRESHTATMVNHNCMVVFGGSGEGDANYLNDLHILDLKTMRWSRPDTKGDVPVPR
DSHSAVSVGNKIFIYGGDCGDRYRGDIGVFNVETSIWSRFVVHGPSPGFRAGHAAVTIGT
KIYMIGGVGDKQYYNDVWVLDTINSLWIRLEVHGQQPQGRFSHTAIVADSDIAIYGGCGE
DERPLNELLILHLGSDHPNDRYNSCGCTMFGSQCNQEKRNFFHDHQTLTKQSNISDPMHT
KRRRMSNSKACESIESEPEEHSLSLSQHSSPSHSDQERALVKQSSNTAAQALPLFKTQHQ
SSGSVKQIPGTQSNPISIFSRTPQDPQFIQEQSHHHKHHQNSHATRTEHKNIEPLSVQNL
IGADVHGKVDGAFDSGYLMTATVNGRIFRGVLFPPGPDVVSRGAFRGHNRRSPTSHMAQR
NLHINRAFIRHSNQAPEPSHHSYLQDHHVRRPSPVFRSAPALSLGREQAKVQNELHGVVL
TLGGPGSGHGGS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggggtctttgggaaatggcgatgtcaagaaagcaacgtggttgcacccaagattcacc
ggctttaacccttctgaacgatgggggcattctgcttgcttctctaatggcttcctctat
atctttggtggatgttgtggaggcctacatttcagcgacgtacttttgctaaaccttgaa
acgatggcttggaccaatctagcaaccaaaggagtcgggccgggtcctagggacagtcac
agtgcagtcatcgtaggccacatgatggttatcttcggtggaaccaatggctgcagaaaa
gttaacgatgttcacattttggatctccaaacccgtgaatggactcgacccgattgtaaa
ggggttgctcctacacctcgggaaagtcacactgctaccatggttaaccataactgcatg
gtggtatttggtggaagtggtgaaggtgatgcaaattacttgaatgatttgcatattttg
gaccttaaaacaatgaggtggagtcgacctgacaccaagggtgatgtccccgtgcctagg
gacagtcacagtgcggtttcggtaggcaacaaaatctttatctatggaggtgattgtggg
gaccgttatcgtggtgacattggtgttttcaatgtcgagacatcgatttggtcaaggttt
gttgttcatggaccatcaccgggatttcgagcaggacatgctgctgtgactattgggaca
aagatttacatgattggtggtgttggtgacaagcaatactataacgatgtttgggtgctt
gatacaataaatagtttgtggattcggctagaggtacatggccaacagccacaagggcgt
ttttctcacactgctattgttgcggattctgacatagccatttacggaggatgtggtgag
gacgagcgacctctaaacgagctactcattttgcatcttggctcagaccatccaaacgac
aggtataacagttgtgggtgcacgatgtttggaagccaatgcaaccaagaaaagcgaaac
ttttttcatgatcatcaaactctcacgaaacagtcaaacatttcagatccaatgcacaca
aaaagaagaaggatgtcgaattcaaaagcttgtgaatcaatagaatcagaaccagaagaa
cattcactttccctttcacaacattcttcgccatctcactcagatcaagaacgagcactt
gttaagcaatcttctaacacagccgctcaagctttaccattgtttaaaactcaacatcaa
agttcaggaagtgtgaagcaaatcccgggcactcaatctaaccctatctcgatcttcagt
cgaactccacaagatccacaattcattcaagagcaatcccatcaccataagcaccatcag
aatagccatgcaactcgcacagaacataaaaacattgagccgttgagtgttcaaaacctg
attggtgcagatgttcatggtaaagttgatggagcattcgactcaggttacttgatgact
gcaacagtcaatggtcgaatctttagaggggtcttgttccctccggggcctgatgttgtt
tcaagaggagcttttcggggtcataatcgtaggtcacccacaagccatatggctcaaaga
aacctacatataaaccgggctttcatcaggcactcaaaccaggcaccggaacccagtcat
catagctacctccaagatcatcatgtccgaagaccatcgcctgtgtttagatcagctccg
gctctatcattagggagagaacaagcgaaggttcaaaatgaactgcatggcgtggttctc
acactgggtggtccagggagcgggcatggtggctcttag
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