Lactuca sativa (garden lettuce): 111880210
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Entry
111880210 CDS
T05352
Name
(RefSeq) protein argonaute 7
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111880210
03036 Chromosome and associated proteins [BR:
lsv03036
]
111880210
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111880210
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111880210
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111880210
microRNA pathway
RISC loading complex
111880210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
HMMR_N
TBCC_N
Motif
Other DBs
NCBI-GeneID:
111880210
NCBI-ProteinID:
XP_023732389
LinkDB
All DBs
Position
4:19001210..19005615
Genome browser
AA seq
1010 aa
AA seq
DB search
MEERENKKCTAKTKSFRGRTHNNPPHQHFYHHLHLHPHYLLQHSNRNFGFLNQNLYHSPS
PPLLPLPPPQYAIAPSLHLPLPLNHAFTPKPHLQKPPWKQNHHLPPLVATSDSHLSHQTA
LEVIPRTINSSMGAKKDELRPVRDSTLPEPLLTVARRPDSGGSEGTIISLLANHFLVKFD
PSQLIYHYDVDISPKPSKDIARLIKQKLVEQNPTILSGANPSYDGRRNLFSPIEFQKDRI
ELCINIPIPIGNPSIPPNCEENQEKSKLFRVNIKIVSKLNGKELSKYLSKEDNDSIPPPQ
DYLQALDVVLRENPLSECIPLGRSLYSTSMGGAKDIGGGAIGLRGFFQSLRPTQQGLALN
VDLTVTAFHESIGVIPYLQKRLSFLNDLSERKTRELTIEEKKEVEKAMKNIRVFVCHRDT
VQRYKVHSLTDESTENLWFRDRNGNNLWVVSYFKEQYNYDIQYRNLPCLQTSRRRPCYLP
MELCVVCEGQKFLGKLSDDQTAKILKLGCQKPRERKAIIDGVMAGPFGPSSGKQAGDFNL
HILKEMTRLNGRILRPPKLKLGDGGEVRDLTPSRHDRQWNFSGSQVFEGSRIGRWALISF
GGTDEQKRIIPKFIDQLTQRCQQLGIFLNKNTVIKPQFESMQVLNNVCLLESKLKKIQRA
ASDNLQLLICVMEKKHKGYADLKRIGETNIGVMSQCCLYQNLARLSSQFLANLALKINAK
IGGCTVALYTSLPAQIPRVLTLDEPVMFLGADVTHPHPLDDFSPSVAAVVGSVNWPAANK
YVSKMRSQTHRQEIIQDLSSMVEEILHDFVRELSKLPKRLIFFRDGVSETQFHKVLRDEL
QAIRDGCSRFTGYNPPITFVVVQKRHHTRLFPAESGGGTSRNLFSDENVPPGTVVDSVIT
HPKEFDFYLCSHWGVKGTSRPTHYHILWDENEFTSDEFQKLVYNLCFTFVRCTKPVSLVP
PCYYAHLAAYRGRLYLDRTVVSPGFTRRGPPKTTPLPKVRESVKNLMFYC
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagagagaacaagaaatgcacagcaaaaacaaagagtttcagaggaagaaca
cataataaccctccacaccaacacttttatcatcatcttcatcttcatccgcactatctt
ttgcagcattccaacagaaatttcggttttcttaatcaaaatctgtaccactctccttca
cctcctcttcttcctctgcctccacctcaatacgccatagctccatctctacatctacct
ctacctctaaatcatgcctttacgccaaaaccccatttgcagaaaccgccatggaagcaa
aatcatcatcttccacctcttgttgctacttctgattcacatctatctcatcaaacagct
ctagaggtgattccaagaacaattaactcatcaatgggagcaaagaaagacgaactgaga
cctgtaagggattcaacactaccagaacctctattaacggtggcaagaaggccggattcc
ggtggctcggaaggaacaattatctcacttttagccaatcatttccttgtaaaattcgac
ccttcacagctaatttaccactacgatgtcgacatctccccgaaaccttcaaaggatatt
gctcgattgatcaaacaaaaactcgtcgaacaaaaccccaccattttatccggtgccaat
cctagctacgatggccggagaaacctttttagcccaatcgagttccaaaaagacagaatt
gaactctgtattaacatcccaattccaataggtaatccttcgattcctccaaattgtgaa
gagaatcaagaaaaatccaagctttttagggtaaacatcaagattgtatcgaaactcaac
ggcaaagaactaagcaaatacttgagtaaagaagacaacgattcaatcccacctccacaa
gactatctccaagcgttagatgttgttcttcgtgaaaaccctttgtcagaatgcatccca
ttaggacgttcactttactcgacctccatgggaggcgctaaagacataggaggtggcgca
attggacttcgaggtttctttcaaagtctccgaccaacacaacaagggcttgcgctcaat
gtagacttaacagtcaccgcttttcatgaaagcattggagtgatcccgtatttgcagaag
cgtctttcttttctgaatgacctttctgagagaaaaacaagagagttgacgattgaagag
aagaaagaagttgaaaaggcgatgaagaacataagggtgttcgtttgtcaccgtgatact
gttcaaagatacaaagttcacagtttgacagatgaatccactgagaatctttggtttcga
gatcgaaatgggaataatttatgggttgtgagctactttaaagaacagtataactatgat
atacaatacaggaacttgccatgtttacagactagtagaagacgaccatgttatcttccg
atggagctttgtgtcgtttgtgaaggccaaaagtttctcggaaaactttccgatgatcaa
actgcaaaaattctgaaattgggttgccaaaaaccacgagaacgaaaagcgatcattgat
ggtgtcatggctggacccttcggtccatcaagtggaaagcaagcaggagacttcaatctt
catattttgaaggagatgacaagattaaatgggcgaattcttcgtcctccaaagcttaaa
cttggagatggtggtgaagtaagagatttgaccccttcacgccatgatcgccaatggaac
ttttcaggtagccaagtttttgaaggaagccgaattgggagatgggctttaattagtttc
ggtggaaccgatgaacaaaaaagaatcattcccaaatttatcgaccaattaactcaaaga
tgtcaacaattaggaatctttctcaacaagaacacagtcataaaaccacagtttgaatca
atgcaagttctaaacaatgtctgtcttctcgaatccaaactcaaaaagatccaaagagcc
gcgtccgataatttacaacttttgatttgtgtgatggagaagaaacataaagggtacgcg
gatttgaagcgcattggagaaacaaacatcggggttatgagccaatgttgtttgtatcaa
aatcttgcgagattgagttctcaattccttgcgaatttggcattgaaaatcaatgccaaa
atcggggggtgtacagttgcactgtacacctcgttaccggctcagatcccaagggttcta
acccttgatgagccggtaatgtttctgggtgcggacgtcacgcatccgcacccacttgat
gatttcagcccctcggtggcggcggttgtcggatcggttaattggccggcggcaaacaag
tacgtttcaaaaatgaggtcgcagactcaccggcaagaaataattcaagatttgagttca
atggtggaggagatattacatgattttgttcgtgagctttcgaaattaccaaaaagattg
attttctttcgtgatggtgttagcgagacacagtttcataaagttcttcgtgatgaattg
caagcgattcgtgatgggtgttcacgtttcaccgggtacaaccccccgattacatttgta
gtggttcaaaaacggcaccacacgaggctgtttccggcagaatcgggcggcggcacctcc
cggaatcttttttccgatgaaaacgtgccgccgggtacggtggtggattcggttatcacc
cacccgaaagagtttgatttttatctttgtagtcattggggtgtaaaggggacaagtcgg
cctacacattatcatatattgtgggatgaaaacgagttcacttctgatgaatttcagaaa
ttggtttataatctttgtttcacttttgtgaggtgtactaaaccggtttcattggtgcca
ccgtgttattatgcacatttggcggcttatcgagggcggttgtatcttgaccggaccgtg
gtgtcgccggggttcacgagacggggcccaccgaagaccaccccgcttcctaaagtacgg
gagagtgttaaaaatcttatgttttattgttaa
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