KEGG   Lactuca sativa (garden lettuce): 111880239
Entry
111880239         CDS       T05352                                 
Name
(RefSeq) probable pectate lyase 8
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv00040  Pentose and glucuronate interconversions
lsv01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    111880239
Enzymes [BR:lsv01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     111880239
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 111880239
NCBI-ProteinID: XP_023732417
LinkDB
Position
9:complement(14221640..14226848)
AA seq 440 aa
MSVSLRFSALCLFLVYMLFLSVNGVSSMEEETELQSLIDNSTMADRRNENIAIEKNDKAV
EENPERVASMVDMSIRNSTERRKLGFLSCGTGNPIDDCWRCDRNWQRHRKRLADCAIGFG
RNAIGGRDGRYYVVTDPNDDDPVHPRPGTLRHAVIQDQPLWIIFKRDMVITLKQELIMNS
FKTIDARGVNVHIANGGCITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADG
DGISIFGSSHIWIDHNSLSNCADGLVDAIMGSTAITVSNNYFTHHNEVMLLGHSDTYDRD
KIMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQGNRYLA
PVNPNAKEVTHRVMTAGRWRHWNWRSEGDLMLNGAFFVPSGKGAGASYARASSLSAKPSS
VVASLTSGSGALVCRRGREC
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgtcggtctctctcagattttcggcgctctgtttatttctggtttatatgcttttcctt
tccgtcaatggcgtttcgagtatggaggaggaaactgagttgcagagcttaatagacaac
tcaacaatggccgataggagaaatgaaaatattgctattgaaaagaatgataaggctgtt
gaagagaatccggaaagggtcgcttctatggttgacatgagcattcgcaatagtactgaa
aggaggaaattaggatttttgtcatgtggcaccgggaacccaatcgacgattgctggcgg
tgtgacaggaactggcagcgccaccgcaagaggttggcagattgcgctattgggttcgga
cgtaacgcaatcggcggtcgtgacggacggtattacgtcgtcaccgatcctaatgacgac
gaccccgtacacccccgaccgggaactctccggcacgccgtcatccaagaccaacctctc
tggatcatcttcaaacgcgacatggtgatcacactaaaacaagaactaatcatgaacagt
ttcaaaacaatcgacgctcgtggagtcaacgtccacatcgcaaacggcggttgcatcaca
atccaatacatcacaaacgtcatcatccacggactccatatccacgactgtaaaccaacc
ggaaacgccatggtccgaagctccccctcacactacggctggcgaacaatggctgacggt
gacggaatatccatcttcggctccagccatatctggatcgaccataattctctctctaac
tgcgccgatggtttagttgacgccattatgggttcaaccgcgattacagtttctaacaat
tacttcacccaccacaacgaggttatgttactaggccacagtgacacctacgacagggac
aaaattatgcaagtcaccatcgcatataatcatttcggtgaaggtcttgttcaaagaatg
ccacgttgtaggcacgggtatttccatgtcgtaaacaatgactacacacattgggtaatg
tatgctattggtggaagtgcagatcccacaattaacagccaaggcaaccgataccttgcc
cctgttaatcctaatgctaaagaggtgactcatagagtgatgacagctggaaggtggagg
cattggaattggagatcggaaggtgacctaatgttgaatggagcattttttgtcccatca
gggaaaggagcgggagccagttacgcacgtgcctcgagcttaagtgctaaaccatcgtct
gttgtggcgtctcttacttcgggatcgggtgcgcttgtttgtcgacgaggcagagaatgt
tag

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