Lactuca sativa (garden lettuce): 111880290 Help Entry 111880290         CDS       T05352                                  Name (RefSeq) protein CHROMATIN REMODELING 5   KO K11367   chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] Organism lsv  Lactuca sativa (garden lettuce) Brite KEGG Orthology (KO) [BR:lsv00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lsv03021]     111880290    03036 Chromosome and associated proteins [BR:lsv03036]     111880290 Transcription machinery [BR:lsv03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      111880290 Chromosome and associated proteins [BR:lsv03036]  Eukaryotic type   Histone modification proteins    HAT complexes     SAGA complex      111880290     SLIK complex      111880290 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom HTH_Hrp3 Helicase_C Chromo CHD1-like_C HDA2-3 ResIII DEAD Chromo_MIT1 SWI2_SNF2 CHDCT2 Motif Other DBs NCBI-GeneID:  111880290 NCBI-ProteinID:  XP_023732470 LinkDB All DBs Position 2:98280089..98293487 Genome browser AA seq 1664 aa AA seqDB search MEDGQYHGHGAAEDDDSLLNLTTSNATTRKTTGRWGSTFWKDCQPMHQKHGSEESKSSSA YNNEDGSGNDLSDVDKANKGQNVDEMLSDDYYELDGDDQSDSKHHKLLNNAAAGGYNSMP QRGVSANNLVSRKKSKDSSRGAYVEDADFEDDEEDEEDEDDPADADFDPDLVTTSVGRGK KGHDDDWDGEDLDEDNSEEDEIDISEDDFYKKPSGMQRQKRGRSSSKSSREPKPSTSTSF SRRKRGRASFDEDDSSPDDDLDDDLEEDFKSTRRKSSHPRKDTSFLTKGSGRINEVRTST RSVRKVSYVESESEEHDDDIKRKGHKDDMEEEDGDSIEKVLWHQPKGMAEEAARTNRSTE PLLLNQLFDSEPDWNNTEFFIKWKGQSHLHCQWKSFSELQNLSGFKKVINYTKKIMEEIR HRRTVSREEIEVIDVSKEMDLDLIKQNCQVERIIADRIGKSSEVPEYLVKWQGLSYAEAT WEKIDDIAFAQAAIDEYKAREAALAAAHGKMVDFQRRKSKASLRKLDEQPDWLKGGKLRD YQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNSQQIHGPFLVVVPLSTLS NWAKEFRKWLPDMNVIVYVGTRASREVCQQYEFFSDMNTGGTTKFDALLTTYEVLLKDKM VLSTIKWNYLMVDEAHRLKNSEASLYTSLKEFSTKNKLLITGTPLQNSVEELWALLHFLD SDKFNSKDEFVQNYKNLSSFNEIELANLHMELRPHILRRVIKDVEKSLPPKIERVLRVEM SPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGYGGDS AISGSSKLERVILSSGKLVILDKLLDRLHETHHRVLIFSQMVKMLDILAEYLSIKGFKYQ RLDGSTKAEVRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL QAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAK KGSAFDKNELSAILRFGAEELFKEDKNEEESKKRLLSMDIDEILERAEKVEQKGAEDEAG HELLSAFKVANFCSAEDDGSFWSRWIKPDAISQAEEALAPRAARNSKSYAEATPSERNSN KRKKKGVELQLQERGIKRRKAAADYSTYQPPALEGASAQVRGWSYGSLPKRDATRFFRAV KKFGNDSQISLIAAEVGGSVEAAPVDAQVELFDALVDGCREAVKGGSMDAKGPLLDFFGV PVKADDVLSRVEELQLLAKRVNRYNDPISQFQALMYLKPATWSKGCGWNQKDDARLLLGI HYHGFGNWEKIRMDEKLGLLKKIAPVELQHHETFLPRAPQLKERASQLLEMELVAVGGKA SGTKGGRKGTKKQKDQFPNHNNPISRTRGKQWKPGSGSPEAKLPKNKIKMTRGTGKKTEP LVKEEGEMSDTEEVYEQFKEVKWMEWCEDVLTEEKKTLERLHRLQTTSADLPKEKVLSRI RNYLQLLGRKIDQIVIDHEEDPYKQEKMTTRLWNYVSTFSNLSGAKLQQIYSKLKQERDS AAGVGVGPSQINGGGGGRGFRNDSYHQSSSTSTLVHKGLDTAKFEAWKRRRRAESDPNTH FQPPPHQRPPFANGTRLPDPSIGILGAAPSARPPAFGQRQGGFT NT seq 4995 nt NT seq  +upstreamnt  +downstreamnt atggaagatggacaatatcatggtcatggtgcagctgaggatgatgatagcttattgaat ttaacaacttctaatgctactacaaggaaaacaaccgggagatggggatcaacattttgg aaggactgtcaacccatgcatcagaagcatgggtcagaggaatcaaaaagcagttctgct tacaacaatgaagacggatctggcaatgatttgtcagatgtggataaggcaaataagggt caaaatgtggatgagatgctgtctgatgattactacgagttggatggagatgaccaaagt gattcaaagcatcacaagctgttaaataatgcagctgcaggtggttataattcaatgcca caacggggagtttctgccaataacttggtgtctagaaagaagtcaaaagattcatctcgg ggtgcatacgtggaagatgctgattttgaagatgacgaggaggatgaagaagatgaagat gaccctgctgatgcagattttgatcccgacttagtcaccacaagtgttggaagagggaag aagggacatgatgatgactgggatggtgaggatttggatgaagataactctgaggaggat gaaatcgacatttcagaagatgatttttataaaaaaccaagtggtatgcaaaggcagaag agagggcgtagtagttcaaagtctagtagagaacccaaaccatctacatctacatctttt agcaggaggaaaagagggagagcttcatttgatgaagatgactcatcgccagatgatgat ttagacgatgatttagaagaggacttcaaaagtacaagaaggaaaagcagccatcctcgc aaagacacatcttttcttacaaaaggttccggaaggatcaatgaagttagaacttctact agatcagtgcggaaagtatcatatgttgaaagcgaaagtgaggagcatgatgacgatatc aagagaaagggccacaaggatgacatggaagaggaagatggtgattcgattgagaaggtg ctatggcatcagccaaagggcatggcagaagaagctgcaagaaccaacagatctacagag cctttactgttgaaccaattatttgactcggagccagattggaacaatactgaatttttt atcaagtggaaaggccagtcacatttgcattgtcaatggaaatcgttttctgaactacaa aatctgagtggctttaaaaaggttataaactacactaagaaaatcatggaggaaataagg cataggagaacagtatctcgtgaggagattgaggtcattgatgtgagcaaggagatggat ctggatcttatcaagcagaattgtcaggttgagagaataattgctgatagaatcggcaaa agttcagaagtgccagagtatttggttaagtggcaaggactctcctatgctgaagcaaca tgggagaagattgatgatattgcttttgcacaagcagcaattgatgaatacaaggctcga gaagctgcccttgcagctgcacatggaaaaatggtagattttcaacgaagaaagagtaaa gcaagtttgagaaaacttgatgaacagccggattggctaaaaggcgggaaactgagagat tatcaacttgaggggttgaattttcttgttaatagttggagaaacgatacaaatgtgata ttagctgatgaaatgggtcttggaaaaacggttcaatctgtttctatgcttggtttcctc cagaactcacaacaaattcatgggccgtttcttgttgttgttcctttatcaaccttgtca aattgggctaaagaattcagaaagtggcttcctgatatgaacgtgatcgtatatgttggg acccgtgctagccgagaggtttgtcagcagtatgagtttttctctgatatgaacactggt ggaactacaaagtttgatgccctattgactacctatgaagttttactaaaggacaagatg gttctatcaacaattaagtggaactatcttatggttgatgaagcacatagattaaaaaat agcgaagcttcattatatacatcactcaaggaattcagcacgaaaaacaagcttcttatt actgggactcccttgcaaaacagtgttgaagaactatgggcgttgcttcactttctggac tctgataaattcaatagcaaggatgaattcgttcaaaactacaagaacctgagctcattc aatgagattgagcttgcgaatcttcatatggagttgcggccccacattctgcgaagagtt ataaaggatgtggagaagtccttgcccccaaagatcgagcgtgttctccgggttgagatg tcccctctacaaaaacagtattacaaatggattcttgaacgcaactttcatgacctcaac aaaggtgtacgtggaaatcaggtttcccttctgaacattgtggtggagttgaagaaatgc tgtaatcatccattcctgtttgaaagcgctgaccatggttatggttatggtggagactct gctattagcggtagcagtaaactggagcgggtaattcttagcagtggaaagctagttatc cttgacaagcttcttgacagacttcatgagacacatcaccgggttctaatattttcacaa atggttaagatgttggatattctagcggaatacctatcaattaaggggttcaagtatcag agacttgatggaagtacaaaggctgaggtccggcatcaagccatggagcattttaatgcg cctggcagtgatgatttctgcttccttctttctactcgtgccggtggtttaggtatcaac cttgcaacagcagacacagtaatcatatttgactctgactggaatcctcaaaatgatctc caggcaatgagcagagcccatagaatcggacaacaggaggttgttaatatctataggttc gtgacaagcaagagtgttgaggaagacatcttggagcgtgcaaaaaagaagatggtactt gaccatttggttattcagaaactaaatgcagagggaagattggagaagaaagaagcgaaa aaagggagtgcatttgacaagaatgagttatcagctattttaagatttggggcggaggaa ctgtttaaagaagataaaaatgaggaagaaagcaaaaagcggcttctgagcatggatatt gatgagattcttgaaagggcagagaaggttgaacagaaaggtgctgaagacgaggcagga catgaattgctgagtgcatttaaggttgcaaatttctgctctgctgaagatgatggaagt ttttggagtcgctggataaaacctgatgccatctcacaggctgaggaagccttagcccct cgagctgcaaggaacagcaagagttatgctgaggcgaccccatctgagagaaatagtaac aaaaggaaaaagaagggtgttgaattacaactacaagagagaggaataaaacgccgaaag gctgctgctgattattctacttatcaaccacctgcacttgagggagcttctgctcaagtc agaggctggtcatatgggagcttaccaaagagagatgctacacgtttttttcgtgcagtg aaaaagtttggaaacgatagccaaatcagcttaatagctgcagaggttggtgggtctgtt gaagctgctccagtagatgcacaggttgagctttttgatgctttagtagatggttgcaga gaagcagttaaaggaggaagtatggatgcaaaggggccattgttggacttttttggtgtt cctgtgaaggctgatgatgtattgagccgagtggaagaacttcaactccttgcaaaacga gtaaaccgctacaatgatccaatctcacagtttcaggctttgatgtacctcaaacctgca acttggtctaaaggttgtggctggaaccagaaggatgatgcaagactgctgctagggatt cactatcatggatttgggaactgggaaaagatacggatggatgaaaagcttgggctcttg aagaagattgctcctgtggaacttcaacaccatgaaactttcctaccacgagctccccaa ttaaaagaaagagcttctcaacttcttgaaatggaacttgtggctgttggtggcaaggcc tctgggaccaaagggggtcgaaagggcactaaaaagcaaaaagatcaatttccaaatcac aacaacccaatttctcgcactagaggcaaacagtggaaaccaggctcagggtctcctgaa gcaaaactcccaaaaaataaaatcaaaatgacacgtggcactggcaagaaaaccgagccc ttggttaaagaggaaggtgagatgtcagacactgaagaagtgtatgaacagttcaaagaa gttaaatggatggaatggtgtgaagatgtcttgactgaagaaaaaaagacacttgagcgt cttcatcgcctacaaaccaccagtgcagatcttcccaaggaaaaggttctttcgagaatt agaaattatttgcagcttctcgggcgaaaaattgatcaaattgttattgaccatgaggag gatccgtataaacaagaaaagatgacaacacgtctatggaactatgtgtccaccttctca aatctatcgggtgccaaacttcaacaaatctattccaaactgaaacaagagagagactca gcagcaggagtaggagtgggcccttcccaaatcaacggaggaggaggaggacgaggtttc agaaacgattcataccaccaatcatcatccacatccacattagtccacaaaggccttgac actgcaaaattcgaagcatggaaaagaagaagacgggccgaatccgacccaaacacccat ttccaaccaccaccacaccaaagacctccctttgctaacgggacccgtttacccgaccca agtatcggaatcctcggggcagccccatccgcccgcccacctgctttcggtcaaagacaa ggaggcttcacgtga

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