Lactuca sativa (garden lettuce): 111880413
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Entry
111880413 CDS
T05352
Name
(RefSeq) ABC transporter B family member 21
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111880413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111880413
04147 Exosome [BR:
lsv04147
]
111880413
04090 CD molecules [BR:
lsv04090
]
111880413
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111880413
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111880413
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111880413
CD molecules [BR:
lsv04090
]
Proteins
111880413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
ABC_ATPase
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_30
AAA_21
DUF87
AAA_15
AAA_25
APS_kinase
AAA_24
nSTAND1
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
111880413
NCBI-ProteinID:
XP_023732609
LinkDB
All DBs
Position
6:complement(125631054..125644289)
Genome browser
AA seq
1251 aa
AA seq
DB search
MSEKTKDSVKEKKQTTDVVPYHKLFAFADYTDYVLMVVGTITAIGGGINMPLQTLLFGEL
IDTFGGTTDKNAIVHEVSKVSLKYVYLALGSGAAAFFQVVCWMVTGERQAARIRSIYLKT
LLRQDVGFFDQENKTGEIIERMSSDTVIIQDAMGEKVGTFIQLASTFFGGFMIAFSKGWL
LSIVLLSSIPLLVISAAFMIVVMEKLKSKGQTAYSLGATVVEQTISSIRTVASFTGEKQA
IAKYDKSLKKAYRAGVQEGLVAGIGSGIFMLCVFCCYSLAIWYGGRLIIEKGYTGGQVIN
IMTVIFLSSFSLGQASPCMTAFASGRVAAFKLFQVIDRKSEIDPYDTSGKKLNDIRGDIE
LQNIVFSYPSRPEEPIFNGFSLRIPSGTTTALVGQSGSGKSTVISLIERFYDPQGGKVII
DAINIKEYNVRWLRGKISLVSQEPVLFSSSIKENIAYGKDGATVKEIKAAAKLANAAKFI
KKFPKGLDTMVGDHGTHMSGGQKQRIAIARAILKDPRILLLDEATSALDAKSERVVQEAL
NRIMVNRTTIIVAHRLSTIQNSDVIAVIHNGKIVEKGSHSLLLKDPDGAYSQLIRLQELT
KQSQNQDKDDQELPKITMASATHSSRHISVSRSIAHKSSNLSNSNHHSFNIPSTDFKEPI
HNNQTDSSLLRLAYLNKPEFPLILLGSIAALVNGATLPIFGYLLSSIIKTFFEPAHKLRK
DSEFWALMLLVLGFASLIATPLRMYFYGVAGCKLIRRIRLKCFKKLVQMEISWFDKLENS
SGLIGAKLSSDAVSVRGLFGDTLSLLVQNTATAGCGLIIAFLANWQLALIVLLLLPLIGL
NGYLQLKFITGFTADTKKLYEDASQVASDAVGSIRTVAAFCAEEKVMKVYEKKCEKPQKA
GIQQGLVSGAGFGMSMLLLYLVYAISFYIGARFVEAGKTTFPKVFQVFLGLSMAAMGVSQ
SGSFVPDSGKAKTASASIFALLDQKSKIDYTDESGTTLKNVKGGIKFSHVTFSYPARPGI
QIFKDLCLTIRSGQTVALVGESGSGKSTVVSLLQRFYDVDSGRITLDGVDIRKLKVRWLR
QQMGLVSQEPVLFNDTIRANIEYGKEGNATEAEIMAAAELANAHKFISSLHRGYDTNVGE
RGIQLSGGQKQRVAIARAIIKGPKILLLDEATSALDAESEKVVQDALDRVIVHRTTLVVA
HRLSTIQGADVIAVVKNGVIAERGTHEKLINIKDGIYASLVAFHTISAAAL
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaaaacgaaggattcagttaaagaaaagaagcaaacaactgacgtagttcca
tatcacaagctttttgcctttgctgactacacagattatgtactaatggtggtggggaca
attactgcgatcggaggtggaatcaatatgcctctccagacattgttatttggggagcta
attgacacatttggaggcactacagataaaaacgccattgttcatgaagtttccaaggta
tccctcaaatatgtctacttggctttggggtcaggagctgcagcattttttcaggtagtt
tgctggatggtcactggtgagagacaggctgcacgtatcagaagtatatacttgaaaaca
ttgttgagacaagatgtgggattttttgatcaagaaaacaagactggagaaattattgaa
cgcatgtctagtgatacagttattattcaggatgctatgggagaaaaggtcggaactttc
atacaactggcttcaacattctttggaggatttatgattgcgttttcaaaggggtggctt
ctttccattgtgttgttatcttcgattcctcttcttgtgatctcagcagcctttatgatt
gttgtgatggaaaagctaaagtctaagggccaaactgcttattctcttggtgcaactgta
gttgaacagacaatcagctctatcagaaccgttgcatcattcacaggggagaagcaagcc
attgccaaatatgataagtctttaaagaaagcttacagggctggggtgcaagagggtttg
gttgctggaatcggttctggtatatttatgttgtgtgtattctgttgctactctttggcc
atatggtatggtggcagattgattatagaaaaaggatatacaggcggacaggttataaac
atcatgactgtgatcttcttaagctctttttctttagggcaggcttcaccatgcatgact
gcatttgcctctggaagagttgcagcatttaaactatttcaggtgatagatcggaagtca
gaaattgatccttatgacactagtggcaagaaacttaatgacattcgtggtgatattgag
ctccagaatattgtttttagttatccatccagacccgaggagcctatttttaacgggttt
tctctgaggataccaagtggcacaaccacggctttagtgggacaaagtggaagtgggaaa
tcgacagtaattagcctaatagagaggttttatgaccctcaaggaggaaaagttattatt
gatgctattaatatcaaagagtataacgtaagatggctaagaggaaagattagtctcgtg
agccaagaacctgttttgtttagttcaagtattaaagagaatattgcttatgggaaagat
ggtgcaacagttaaagaaatcaaagcggctgctaaactcgcaaatgctgccaaatttatc
aaaaaattccctaagggactcgatacaatggtgggtgatcatggaactcatatgtcagga
ggacaaaagcaaagaatagccatagctcgggcaatcttgaaagacccaaggattttacta
ctagatgaagctacaagtgctcttgatgcaaaatccgaaagggttgttcaagaagcgctc
aatagaatcatggttaaccgaactactatcattgtagcccatcgattgagcactatacaa
aattctgatgtaattgccgttattcacaatgggaagattgttgagaaaggttcacactct
ttgcttttaaaagatcctgacggtgcatactcccaacttatacgattgcaagaactcacc
aaacaatcacaaaatcaagacaaggatgatcaagaattgcccaagattaccatggcctct
gcaacacattcaagcagacatatttctgtctcaagatccatagctcataaatcatctaat
cttagtaatagtaatcatcactcatttaacataccctctactgatttcaaggaaccaata
cacaataatcaaaccgattcttcccttttacgcttggcttatctgaacaagcctgaattc
ccattgatcctactaggttccatagccgctctagttaatggagcaactttacctattttt
ggttatcttctttcgagtattataaagacattttttgagcccgctcataaacttcgaaag
gattcggagttttgggcattgatgcttcttgttcttgggtttgcaagtttaatagcgaca
ccacttagaatgtatttttatggtgttgctggttgtaaactgatacgaagaatccgatta
aaatgtttcaaaaaactggttcaaatggagataagttggtttgataagttagaaaattcg
agcggtttgattggggcaaagttgtcttcagatgctgtatcagtgcgaggtttatttggg
gatacgctttctttacttgttcagaacaccgccactgctggttgcggtttaataatcgcg
tttcttgcaaattggcagttggctcttatagtcttgttattgttaccactaattggcctt
aacgggtatcttcaattaaaattcattacaggattcactgctgatacgaagaaactatac
gaggatgcaagtcaagttgcaagtgatgcagttggaagcattagaacagttgctgctttt
tgtgcagaagagaaggtgatgaaagtatatgaaaagaaatgtgaaaaacctcaaaaagca
ggaatccaacaaggtttagttagtggtgctggatttggcatgtctatgttattgttatat
ttagtatatgcaatcagcttttatatcggagctcgctttgttgaagccggaaagactaca
ttccctaaagtattccaggtgtttttggggttgagtatggcagcaatgggtgtttctcaa
tcaggatcctttgttccagattctggaaaagccaagactgcttcggcttcaatttttgct
cttctagaccaaaaatcaaaaatcgactatactgatgagtccggaactacattaaaaaat
gtgaaggggggtatcaagtttagtcatgtcacttttagttatcctgctagacccggcatt
caaatcttcaaagacctttgtttgaccattcgttcaggccagactgtagctcttgttggc
gaaagtggaagtggaaagtcaactgtggtttctttgttgcaaaggttctatgatgttgat
tcaggccgaataactcttgatggagttgacatccgaaagctaaaagtgaggtggttaaga
cagcagatgggtctagtaagtcaagagcctgttttgtttaatgacaccatccgtgcaaat
attgagtatgggaaggaaggcaatgccacagaggcagaaatcatggcagctgcagaacta
gcaaatgcccataaattcattagcagcctacaccgggggtatgatacgaatgtgggggaa
agaggtatccaattgtcgggagggcaaaagcaaagagtggcaatagcaagagcaataata
aagggtccgaagatactattactagatgaggccactagtgctctagatgctgaatctgaa
aaagtggtacaagatgcacttgatagagttattgtacatagaaccacacttgttgtggct
cataggttatccacaatccaaggggcggatgttattgcagtggtgaaaaatggagtcatt
gcagagagagggacacatgagaaacttatcaatatcaaagatggtatatatgcatcatta
gttgcttttcatacaattagtgctgctgctttgtaa
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integrated database retrieval system
