Lactuca sativa (garden lettuce): 111880819
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Entry
111880819 CDS
T05352
Name
(RefSeq) chromatin assembly factor 1 subunit FAS2
KO
K10751
chromatin assembly factor 1 subunit B
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsv03036
]
111880819
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111880819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
NBCH_WD40
WDR90_beta-prop_4th
PorZ_N_b_propeller
Motif
Other DBs
NCBI-GeneID:
111880819
NCBI-ProteinID:
XP_023733004
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Position
7:complement(38375987..38378830)
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AA seq
466 aa
AA seq
DB search
MKGGTLQINWHDTKPVLTLDFHPISGILATGGADYDIKLWLIASEEGEKKVPTATYQNSL
SYHGSAINVIRFSPSGELLASGADGGELIIWKLHNTDSGQVWKVLKTLSFHRKDVLDLEW
STDGLFLISGSVDNSCLIWDVNKGSVHQILDAHFHYVQGVAWDPLNKYAASLSSDRTCRI
YVNKPQNKTKGSEKLNYVCQHLLAKVEPQVVEEVKSAKHHLFHDETLPSFFRRLAWSPDG
SFLLVPAGSYKLSPTSEPVNTAYILSRKDLSRPALMLPGASKAVVAVRFCPLAFSLRGLT
SCCSSFKLPYRLIFAVATLNSLYVYDTEGIEPIAVLAGLHYAAITDISWSPTAKFLAVSS
QDGYCTLLEFENNELGSPVSFSENKQVLSEQNIINVDDLESPERIGKGNAMVIDDTQEKE
TVKPELESEPKPEPELAQPSVVIPTKEKPAVPSKPAKRRITPMAID
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagggacccttcagatcaattggcacgacacaaaaccggttctaaccctagat
tttcaccctatttccggcatcctcgccacaggtggcgccgattacgatatcaagctatgg
ctaatagcttctgaagaaggtgaaaagaaagttccaacagctacttaccaaaatagcctt
tcttaccatggatcagctatcaatgttatccgattctccccttctggagagctgcttgct
tctggtgctgatgggggtgagctaataatatggaagctacacaacactgattctggccaa
gtatggaaggttctcaagacattatcgtttcatcgaaaggatgtgttggatttggagtgg
tctactgatggcttatttctcatttctggatcagttgataactcatgtctcatatgggat
gttaataaaggatctgtgcatcagattctagatgctcatttccattatgttcaaggtgta
gcatgggatcctttaaacaaatatgcagcttcacttagttcagatagaacatgtcgcata
tatgtcaacaaaccacaaaataaaacaaaaggaagtgagaagcttaattatgtatgtcaa
catcttcttgcaaaagtggaaccacaagtggtggaagaagtcaagtctgctaaacaccat
cttttccatgatgagacactcccatctttcttcagaagattagcctggtctcctgatggc
tcatttcttcttgtgccagctggttcttacaagctctcacccacttcagaacctgtcaac
actgcttatattttgtcacgaaaagatctctcaaggcctgctttaatgctccctggtgca
agcaaagctgttgtagcagtgcgtttctgccctttggctttcagtctccgtgggttgacc
tcatgttgttcatctttcaagctcccatatcgcctgatatttgcagttgccacattaaac
tcattatatgtttatgacactgaaggcattgagccaatagcagtcttagctggacttcac
tatgcagccataactgatatttcatggtcaccaacagccaagtttttggcagtgtcttct
caagatggttactgtacactgttggaatttgagaacaatgaattgggatcacccgtctct
ttctcagaaaataagcaagtcttatccgagcaaaatataatcaatgttgatgatctggaa
agcccggaaagaatcggaaaagggaacgccatggttatcgatgatactcaagaaaaggaa
acagtgaaaccggaattggaatcggaaccaaaaccggaaccggaattggcacagccaagt
gtagtgattccaacgaaagagaaaccagcggttccaagtaaaccagccaagagacgaatt
acaccaatggccatagattaa
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