KEGG   Lactuca sativa (garden lettuce): 111880852
Entry
111880852         CDS       T05352                                 
Name
(RefSeq) cullin-4
  KO
K10609  cullin 4
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03420  Nucleotide excision repair
lsv04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111880852
  09124 Replication and repair
   03420 Nucleotide excision repair
    111880852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111880852
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111880852
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsv04147]
    111880852
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     111880852
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      111880852
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      111880852
Exosome [BR:lsv04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   111880852
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 111880852
NCBI-ProteinID: XP_023733035
LinkDB
Position
7:complement(40296184..40304239)
AA seq 833 aa
MSQPNTSTSNNNRKRSSTTCTSPQPPTTTTTTGGDSGGGGGAHFLAMKKAKSQAVSCSLD
NKNGFQQHQFDNNPSAEPSSMIEDPTENDAGRASSAGGFTANLARKKATPPQPAKKLVIK
LLKAKPTLPTNFEENTWAVLKSAISAIFLKQPDPCDLEKLYQAVNDLCLYKMGGSLYQRI
ERECEAHISAALNSLVGQSEDLVVFLSLVQKTWQDFCDQMLMIRGIALYLDRTYVKQTPT
VRSLWDMGLQLFRKHLSLASEVEHKTVFGLLKMIESERLGEAVDRTLLNHLLKMFIALGI
YSESFEKPFLECTSEFYAAEGVKYMQYSDVPDYLKHVEIRLHEEHDRCLLYLDATTRKPL
VATAERQLLELHISAILDKGFTMLMDGNRTQDLRRMYTLFHRVNALESLRQALSSYIRKT
GQGIVTDEEKDKDMVFSLLEFKLSLDKIWEDSFSKNDVFCNTIKEAFEHLINLRQNRPAE
LIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSA
SIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVH
VLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGK
KELAVSLFQTVVLMLFNDAQKLSFQDIKDATSIEDKELRRTLQSLACGKVRVLQKIPKGR
EVDDNDSFMFNDVFTAPLYRIKVNAIQLKETVEENASTTERVFQDRQYQVDAAIVRIMKT
RKVLSHTLLITELFQQLKFPIKPVDLKKRIESLIDREYLERDKSNPQIYNYLA
NT seq 2502 nt   +upstreamnt  +downstreamnt
atgtcgcaacccaacactagtacctccaacaacaaccgtaagcgctcatctacaacctgc
acatctccacaaccacccaccaccaccaccacaaccggcggcgacagcggcggcggcgga
ggagctcacttcttggcgatgaagaaggccaaatcacaggccgtatcttgctctttggac
aacaaaaacggcttccagcaacatcaatttgataataatccatctgccgaaccttcttcc
atgatcgaagatcccactgaaaacgatgctggacgcgcatcctctgctggtggattcacc
gccaatttggctcgtaaaaaagcaacgcctcctcaaccagctaagaagctcgtaatcaag
ctactcaaagccaagccaactctaccaacaaactttgaggagaacacatgggcagtcttg
aagtcagccattagtgccatattcttgaagcaaccagatccttgtgatttggagaagctt
tatcaagctgtgaatgatctttgtctctacaaaatggggggaagtctttaccaaaggatt
gagagggagtgtgaagcccatatatctgctgctttaaattcattagttgggcaaagtgaa
gatcttgtggtgttcttatcacttgtgcagaaaacatggcaagatttttgtgatcaaatg
ttgatgatccgtggtatagcattgtatcttgatcgaacctatgtgaaacaaactccaact
gtaagatcattatgggacatggggcttcaactatttaggaagcatttatcactagcttca
gaagttgagcataaaacagtttttggccttctgaaaatgatagagagtgagagattaggt
gaagcagttgatagaacactccttaatcatcttttaaagatgttcattgccttgggaatt
tactctgagagttttgagaagccattccttgaatgcacatcagaattctatgctgctgaa
ggagtaaaatacatgcaatactccgatgttccagattatttaaaacacgtggagataagg
ttgcatgaagaacatgacaggtgtctactctatcttgatgctactacaagaaaacctttg
gtagcaactgctgaaaggcaactccttgagctccatatttctgcaatactcgataagggt
ttcacaatgttgatggatgggaatcgaactcaagatcttagaagaatgtatacacttttc
cacagagtgaatgcccttgaatccttaaggcaagctcttagctcatacatcagaaaaaca
ggtcaaggcattgtgacagatgaagaaaaagacaaagacatggtcttctcccttttggaa
ttcaaactctctcttgataaaatatgggaagatagtttttcaaagaatgatgttttttgc
aacacaattaaagaagcctttgaacacctcatcaatctacgccagaatcggcctgctgag
ttgattgctaaatttttggatgagaaattgcgtgctggaaataagggtacatctgaggaa
gaattggagggaactcttgataaagttttggttcttttcagatttatacagggtaaggat
gtgtttgaagcattctataaaaaggatcttgcaaaaaggcttcttttgggaaagagtgca
tctattgatgctgaaaaatctatgatctccaagttgaaaaccgaatgtggtagtcagttc
accaacaagcttgaaggaatgttcaaggacatagagttatcgaaggagataaatgaatct
ttcaagcaatcatctcaagcaaggacgaaactaccctcgggaattgaaatgagtgtccat
gtcttaacaactgggtattggccaacatatccaccaatggatgtccgccttccccatgaa
ctcaatgtttatcaggacatatttaaagagttttacttgagcaaatacagtggtaggcga
ttaatgtggcagaattcattaggtcactgtgtcttgaaagcagaatttccaaagggcaaa
aaagaacttgcagtttccttatttcagacagttgttttgatgctgttcaatgatgcacaa
aagcttagttttcaagatattaaggatgctacaagcattgaggacaaagaactgaggagg
actctccagtcccttgcttgtggaaaagtccgtgtccttcaaaagattccaaaagggagg
gaagtggatgacaatgattccttcatgtttaatgatgtatttactgctcctctttatcgt
ataaaggtcaatgctatccaattgaaggaaaccgtggaagaaaatgcaagcaccacagag
agagttttccaagatcgtcaatatcaggttgatgctgctattgttcggattatgaaaact
agaaaagttctgagtcatactcttctgataactgaactctttcagcagctaaagtttcca
ataaaaccagttgatttgaagaagaggattgaaagcttgattgatagggagtatttggag
agagacaagagcaaccctcagatatacaattatcttgcatga

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