Lactuca sativa (garden lettuce): 111880971
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Entry
111880971 CDS
T05352
Name
(RefSeq) 26S proteasome regulatory subunit 4 homolog A
KO
K03062
26S proteasome regulatory subunit T2
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
111880971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lsv03051
]
111880971
Proteasome [BR:
lsv03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
111880971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
DUF815
nSTAND3
AAA_16
AAA_5
AAA_2
RuvB_N
ATPase
TIP49
AAA_lid_PRS2_C
RNA_helicase
AAA_3
NPHP3_N
AAA_24
AAA_28
NB-ARC
Sigma54_activat
DUF1128
TsaE
Mg_chelatase
AAA_7
IstB_IS21
Parvo_NS1
NACHT
AAA_25
Zeta_toxin
ABC_tran
Motif
Other DBs
NCBI-GeneID:
111880971
NCBI-ProteinID:
XP_023733147
LinkDB
All DBs
Position
5:356497197..356499736
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AA seq
445 aa
AA seq
DB search
MGQGTPGGMNRQGMPGDRKNDGEKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPH
SKCRLRLLKLERIKDYLLMEEEFVANQERLKPQEEKTEEDRSKVDDLRGSPMSVGNLEEL
IDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDDVDPMVSVMK
VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL
AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY
DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNKIESLDPALLRPGRIDRKIEFPL
PDIKTRRRIFQIHTSRMTLSDDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT
HPDFKKAKDKVMFKKKEGVPEGLYM
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagggaactcccggcggtatgaaccggcaaggtatgccaggcgatcgaaagaac
gatggcgagaagaaggagaagaaatttgagccagcagcaccgccggctcgtgttggacga
aaacagcggaagcagaagggaccagaagcagcggctaggttacccacggtgacgccacat
tcaaagtgtaggctaaggctcttaaagcttgagcgaattaaagattacttgttgatggaa
gaggagtttgtggctaatcaggagaggttgaagcctcaggaagagaagactgaagaagat
aggtcaaaggtcgacgatcttcgtggatctccgatgagtgttggaaacctcgaggagctt
attgacgagaatcacgctattgtatcgtcatcagtcggaccggagtattacgttggtatt
ttgtcgtttgtcgataaggatcagcttgagccaggatgtgcaatcttgatgcacaataag
gttctttctgttgttggtcttcttcaagacgatgtggatcccatggtgtctgtgatgaaa
gttgagaaggctcctttggagtcttatgctgacattggtggactagatgcccagatacaa
gaaatcaaggaggcagtggagctccctctgactcaccctgaattatacgaggacatcggt
atcaagcctccaaagggagtcatactctatggagagcctggaacaggcaagacattgctt
gcaaaggcagtggcaaactccacatcagcaactttcttacgtgttgttggaagtgagttg
attcagaagtaccttggagatggtcctaagttggtgagagaacttttcagagttgctgat
gacctctccccatctatcgtcttcattgatgaaatcgatgctgttggaacaaagaggtat
gatgcccattctggaggtgaacgtgaaattcagaggactatgttggagttgttgaatcag
ttggatggatttgattcaagaggtgatgtgaaagtgatacttgccactaataaaattgaa
agtcttgatcctgctttgcttcgacctggacgtatagataggaagattgagtttccactt
cctgacatcaaaacaaggaggcgtatattccagatacacacatcaagaatgacactatca
gatgatgtgaacttggaggaatttgtgatgacaaaagatgagttctcgggggctgatatc
aaggctatttgcactgaggctggattgcttgctctaagagaacgtcgaatgaaggtgaca
catccagattttaagaaggccaaggacaaggttatgttcaagaagaaagaaggtgttcca
gaagggctctatatgtga
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