Lactuca sativa (garden lettuce): 111881139
Help
Entry
111881139 CDS
T05352
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111881139
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
111881139
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
111881139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
111881139
NCBI-ProteinID:
XP_023733304
LinkDB
All DBs
Position
4:complement(312333091..312336085)
Genome browser
AA seq
548 aa
AA seq
DB search
MKIVTYNVNGLRPRISQYGSLRKLLDSLDSDIICFQETKLSRQELRADVVSADGYESFFS
CTRSLEKGRTGYSGVATFCKVNSAFSSNEVALPLDAEEGFTGVLENSKGFTSKKHDLLTC
VEGLEGFNRDVLLKIDNEGRCIITDHGHFVLFNIYGPRAASDDTERIEFKLSFYKILQKR
WESFMLKGKRIIVVGDLNIAPSSIDRCDAGPDFENNEFRSWFRSLLVENGGLFFDVFRGK
HPERKEAYTCWSTNTGGEMFNFGSRIDHILISGSCIHENKDLKGHNFFSCHVKDCDILTQ
FKRWKPGTTPSYRWKGGGSIKLEGSDHAPVFMSLKEIPDIHLHNTPPLSTRYCPQVRGCQ
QTLVSMLSRRQSTEEVKAHEDHKEGVKRPVFDSTRLIQTNDIIKIEAMNFTEMKKKPKKN
HSSQLSLTSFFQTTSKSESVEICETEINQSESDQHHETESNGCNSSQSDQSKIALLEWKR
IQEFMQKSIPVCKGHGEQCVSRVVKKAGPTFGRQFYVCARAEGPASNPEANCGYFSWADS
RSKRKQSK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtaacgtataacgtgaacggactgagacctcgaatttctcagtatggctcc
ctccgtaaactccttgattctcttgattccgacatcatctgctttcaggaaacgaaatta
tctagacaagaactgagagctgacgtagtttcagcagatgggtacgagtccttcttttct
tgcacacgttctcttgaaaaaggccgcactggttattccggtgttgcaacattttgcaaa
gtaaattctgctttttcaagcaatgaagttgcacttccacttgatgcagaagagggtttc
actggtgttctagagaattctaaaggatttacatctaaaaaacacgatcttctcacatgt
gtcgaagggcttgagggatttaacagagatgtacttcttaaaattgacaatgaggggcgt
tgtattatcactgatcatggtcattttgttcttttcaacatttatgggcctcgagctgca
tctgatgacacagaaagaattgaattcaagctctcattctacaagatacttcagaaaaga
tgggagtcttttatgcttaaaggaaagaggataattgttgttggtgatttaaacattgct
ccttcttctatagataggtgtgatgctggaccagattttgagaataatgagtttagaagc
tggtttagatctttattagtggaaaatggaggcttgttctttgatgtgttcagaggaaaa
catcctgaaagaaaagaagcgtatacatgttggtcaacaaacacaggtggtgaaatgttc
aattttggttcaagaattgatcatattttaattagtggttcatgcatacatgaaaataag
gatctcaaaggtcacaactttttctcatgccatgttaaagattgtgatatattaacacaa
ttcaaacggtggaaacccgggaccacaccaagctatagatggaaaggagggggaagcata
aagttagaaggttccgatcatgcccctgtcttcatgagtttaaaagaaatccccgacatt
cacctgcataacactccacctttatccactagatactgtcctcaagttagaggatgtcag
caaactcttgtatcgatgttatcaagaaggcaatcaacagaggaagtgaaagcccatgaa
gatcataaagaaggagttaaaagacctgtttttgattccacaagattaattcaaacaaat
gatattatcaaaatcgaagcaatgaattttacagaaatgaagaaaaaaccaaaaaagaat
cattcatcacagctctcactcacatccttttttcaaaccacttcaaaaagtgaatctgtt
gagatttgtgaaactgagattaatcaaagtgaatctgatcaacatcatgagactgaatcc
aacggttgtaattcatctcaatctgatcagagtaaaattgctttattagagtggaaaaga
attcaagaattcatgcaaaaaagtatacctgtgtgtaaaggtcatggtgaacaatgtgtt
tctcgggtcgtgaagaaagcgggacccacttttggtcgacagttttatgtttgtgctcgt
gcagagggacccgcatcgaatcctgaagcgaattgtgggtatttttcgtgggctgattca
agatctaagcggaaacagagcaagtga
DBGET
integrated database retrieval system
