Lactuca sativa (garden lettuce): 111881380
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Entry
111881380 CDS
T05352
Name
(RefSeq) axial regulator YABBY 1
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111881380
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
111881380
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GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
111881380
NCBI-ProteinID:
XP_023733541
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Position
7:10672528..10676668
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AA seq
223 aa
AA seq
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MSSSAAFSPDHHHHHLSPPSEQLCYVQCNFCDTVLAVSVPCSSLFTTVTVRCGHCTNLLS
VNMRALLFPASAAAVAANAAANQLHLGHNFFSPQNLMDEMRNAPSNLFINHPNPNEPVTP
VRIDELPKPPVANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHF
PHIHFGLMPDQPVKKPNVCQQEGDDLLMKDGFLTTANVGVSPY
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcagctgctttttcaccggaccaccaccaccaccacctctctcctccctcc
gaacagctctgctatgtccaatgcaacttctgtgatactgtactcgcggtgagcgttcct
tgcagcagtttgttcactaccgttactgttcgatgtggccactgcactaatctcttgtct
gtcaacatgcgagctcttctctttcctgcttccgccgcagctgttgccgccaacgccgca
gctaatcaactccatcttggccataatttcttctctcctcaaaaccttatggatgagatg
agaaacgccccatccaatttgttcatcaaccatccaaatccaaatgagccggttactcct
gttcgaattgatgagcttcccaaacctccagtggcaaacagacctccagagaagcgccaa
agagtgccttctgcttacaacagattcatcaaggaagagatccaacgtatcaaagcagga
aaccctgatatcagtcacagagaggccttcagtgcagctgcaaagaattgggcccatttt
cctcacatccacttcggacttatgcctgatcaacccgtgaagaaacccaatgtgtgccaa
caggaaggagatgatctgctcatgaaagatggatttctgaccactgccaatgtgggtgtt
tcgccttactga
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