Lactuca sativa (garden lettuce): 111881410 Help Entry 111881410         CDS       T05352                                  Name (RefSeq) autophagy-related protein 16   KO K17890   autophagy-related protein 16-1 Organism lsv  Lactuca sativa (garden lettuce) Pathway lsv04136   Autophagy - other Brite KEGG Orthology (KO) [BR:lsv00001]  09140 Cellular Processes   09141 Transport and catabolism    04136 Autophagy - other     111881410  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lsv04131]     111881410    03029 Mitochondrial biogenesis [BR:lsv03029]     111881410 Membrane trafficking [BR:lsv04131]  Autophagy   Autophagosome formation proteins    Atg12 conjugation proteins     111881410  Others   Specific organelles associated proteins    Auto phagosome     111881410 Mitochondrial biogenesis [BR:lsv03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     111881410 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st WD40 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML ATG16 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_SPT8 ASA1 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N CFAP251_N Beta-prop_ACSF4 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_DCAF4 WDR54 PAC11 eIF2A Beta-prop_Vps41 Beta-prop_RIG_1st Beta-prop_EIPR1 Beta-prop_WDR75_2nd B-prop_COPA_B_2nd PQQ_2 Cytochrom_D1 IPGA1_CC CEP135_N SHE3 ZapB_rel Motif Other DBs NCBI-GeneID:  111881410 NCBI-ProteinID:  XP_023733570 LinkDB All DBs Position 1:complement(34480542..34482941) Genome browser AA seq 509 aa AA seqDB search MSEDEIAIEAIKHALKALRKRHLLEEGAHGPAIIALSKPIASQGSEWKDKAETLELELQQ CYKAQSRLSEQLVVEVAESRAAKSLVQEKEALIPNLENDLSQARDECSRLAALLEEKTKG LELLMGENKELKSQYEEMRTRAINAETENKTLIDRWMLQKMQDAERLNEANALYEDMLGK LKASGLEQLARQQIDGVVRQSEEGAEYYVESTIPNTCNHRIPAHEGGCASILFENTSGKL LTGGQDQTVKMWDTTTGQLTKTYHGCIGSILDLTLTNDNTCLIAASSSNNLYAWDTNTGR VRHTLTGHKDKVCAVDVSRFSNRHVASSAYDRTIKIWDLNKGYCVNTIIFPSNCNTLSFT PDGQTICSGHMDGHLRLWDMKSGKLLSEVAAHSLAVTSISLSRNGNTVLTSGRDNLHNLF DTRTLEVMGTLRANGNRVASNWSRSCISADDNYVAAGSVDGVVHVWSIAKGNIVSTLKEH TGSVLSCSWSGIGKPLATSDRNGIVCLWT NT seq 1530 nt NT seq  +upstreamnt  +downstreamnt atgtcagaagacgaaattgcgatagaagcaataaagcatgctttgaaggctcttcggaag cggcatctgctggaggagggagctcacgggcctgctattatagctctttctaaacctatt gcttcccagggttcagaatggaaggataaagcagaaactcttgaattggaacttcagcaa tgttacaaagctcaatctcgattatctgagcagcttgtggtggaagtggccgaatctagg gctgcaaaatctttagtccaggagaaagaagccttaattcctaatcttgaaaatgacctt tctcaagcaagggatgaatgttctcgcttggctgcacttctagaggaaaagactaaaggc ctagaattgcttatgggtgagaataaggaactgaaatctcaatatgaagaaatgagaact agagctatcaatgcagagactgaaaacaagacattgattgatcggtggatgttgcagaaa atgcaagatgctgaacgccttaacgaggcgaatgctttatatgaagacatgctaggtaag ctcaaagccagtggactcgaacaacttgcaagacaacagatagacggtgtagtccgccaa agtgaagaaggagctgaatactacgtggagtccaccataccgaacacctgcaaccaccgg atccccgcccacgaaggtggctgtgcttcaatcctcttcgaaaacacttccgggaaatta ctcaccggaggacaagaccaaactgttaaaatgtgggacacaacaaccggtcaactcact aaaacctaccatggttgcatcggatccatccttgatctcacccttacaaatgacaacaca tgtctcatagcagcaagcagttccaacaacttatacgcatgggacacaaatacgggtcgt gttcgccacaccctcacaggtcataaagataaagtatgtgctgttgatgtcagcagattc tctaatcgccatgtcgccagctcagcgtatgaccggacaatcaagatatgggatcttaac aaagggtattgtgtcaacacgattatcttcccgagtaattgtaatactctgtctttcacg ccagatggacagacgatttgttcgggacacatggatgggcatttaaggttgtgggacatg aagagtgggaaattattgagtgaggttgcggcgcattctcttgctgtgacctctatttct ctttctagaaatgggaacacggtgttgacaagtgggagggataatttgcataatttgttt gatacaaggactcttgaagtgatggggacattgagggcgaatgggaatagagttgcttct aattggagtagatcttgtattagtgctgatgataattatgttgctgctggatctgttgat ggtgttgttcatgtctggtcgattgccaagggtaatatcgtcagtacacttaaggaacat acgggttcggttttgtcttgttcttggagtggaattgggaaaccgttggctacatcggat aggaatggaatcgtttgtttgtggacataa

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