Lactuca sativa (garden lettuce): 111881625
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Entry
111881625 CDS
T05352
Symbol
LOC111881625
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111881625 (LOC111881625)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111881625 (LOC111881625)
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111881625 (LOC111881625)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
111881625
NCBI-ProteinID:
XP_023733792
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All DBs
Position
7:complement(72431258..72435090)
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AA seq
702 aa
AA seq
DB search
MNKYGFEGISTTRPTRPIPTSSKSFKNGIRKGSESLKSIGRSLGFGVSRAVFPEDLKASE
NKILDPQDTFLLTWNKYFVASCILAVSIDPLFFYLPVFDESKTCLGIDNNLAIIATTLRT
VVDVFYLIHMALQFRTAYIAPSSRVFGRGELVIDPGQIAKRYMRWYFIIDFLAVVPLPQI
VVWRYLHTSRGSDVLATKQALLIIILLQYIPRFARIVPLTSELKRTAGVVAETAWAGAAY
YLLLYMLASHIVGAFWYLLSVERKDTCWQRACERKHFNKNFLYCGNERMAGYDTWRDVSG
QILKDACSTDGDNPPFDFGIFEQALSSGIVSSKNFVSKYCYCLWWGLQNLSTLGQGLETS
TYPGESIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQD
LRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLGLVKRVPLFENMDETLLD
AICERLKPCLYTNNTYIVREGDPVDEMLFIIRGRLESATTDGGRSGFFNSGFLKEGDFCG
EELLTWALDPKSGANLPSSTRTVKALREVEAFALPADELKFVAGQFRRLHSRQVQHTFRF
YSQQWRTWAACFIQAAWRRYSKRKVLEQRRKEEEEAELAARKNGGGGGGGGGSSYSLGAT
FLASRFAANALRGVHRNRNLKSARELMKLQKPPEPDFTADAD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatacggatttgagggtataagtacaacccgtccaactcgcccaattcccacc
tcctcaaaatccttcaaaaacggaatcagaaaaggatcagaaagcctgaaatccataggt
agatcactagggtttggcgtttcacgtgctgtgttccccgaagacctcaaagcctctgaa
aacaaaatcctagaccctcaagatacattcctactcacatggaacaaatactttgttgcc
tcatgtattctcgcagtttccatagacccacttttcttctatcttccggttttcgatgag
tcaaaaacatgccttggaattgataacaacttggctattattgctacaactttgagaact
gttgtagatgtgttctatcttatccatatggcccttcaattccgcactgcctacattgcc
ccttcatctagggtttttggacgcggtgaacttgtgattgatcccggccagattgctaag
agatatatgaggtggtattttataatcgatttccttgcggttgttcccttgcctcagatt
gttgtgtggagatatctacatacgtctagaggttcagacgtattagctacaaaacaagct
ttgcttattatcatactccttcaatacattccaagatttgcaagaatcgtccctttaact
tccgaactcaaaagaaccgctggtgtagttgctgaaaccgcatgggccggtgctgcttac
tacttattgctctacatgctcgccagtcatatagttggggcgttttggtatttattgtct
gtagaacgaaaggatacgtgttggcaaagagcttgtgaaaggaagcattttaataagaat
tttttgtactgtgggaatgaacgcatggcgggttacgacacgtggcgcgatgttagtggc
cagattttgaaagatgcttgctctaccgatggtgataatccgccttttgattttgggatt
tttgaacaggcgttatcctcggggattgtttcttctaaaaattttgtttcaaagtactgt
tattgcctctggtggggcctgcagaatttgagcacacttggtcaggggcttgaaaccagc
acttatcctggagagagtatattttccattgcattagccatatttgggctcattctcttt
gctctgttgattgggaatatgcagacgtatcttcaatctcttacaatccgacttgaagaa
atgagagtgaagagacgtgactcagaacaatggatgcatcatcgattacttccgcaagat
ctcagagaacgtgtgagacgctatgatcaatacaaatggttagaaactcgaggagttgat
gaagaaaatttggttcagaatctacccaaggatctcagaagagacataaaacgtcatctt
tgtctaggtttagtcaagcgggttccgttgtttgagaacatggatgagacgttactagat
gcgatttgtgaacgattgaaaccgtgtttatacacgaacaatacttacatagttcgagaa
ggagatccggtggatgaaatgctcttcataatacgcggtcgtctcgagagcgccaccaca
gacggcggaagaagcggtttcttcaacagcggttttctaaaagaaggagatttctgcggg
gaggagcttctaacatgggcgttggaccctaaatccggagctaaccttccgtcttccact
agaacagtcaaagcgttgagagaagtcgaagcgtttgccctaccggccgacgaattgaaa
ttcgtcgccggtcagttccggcggcttcacagtcgacaggtacagcacactttccgattt
tactcacagcagtggcggacttgggcggcgtgtttcattcaggcggcctggcggagatat
tctaaacggaaggttttggagcagcggcggaaggaagaagaggaagcggaattggcggcg
cgtaaaaatggaggtggtggtggtggtggcggtggaagttcttatagccttggagctact
tttttggcgtcgagatttgccgctaatgctcttcgtggagttcaccggaatcggaacctg
aagagtgctcgggaattgatgaagttgcagaagcctccggaaccggatttcactgcagac
gctgattag
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