Lactuca sativa (garden lettuce): 111881814
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Entry
111881814 CDS
T05352
Name
(RefSeq) long chain base biosynthesis protein 1 isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00600
Sphingolipid metabolism
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
111881814
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsv01007
]
111881814
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
111881814
Amino acid related enzymes [BR:
lsv01007
]
Aminotransferase (transaminase)
Class II
111881814
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
111881814
NCBI-ProteinID:
XP_023733971
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Position
5:complement(231489132..231492612)
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AA seq
489 aa
AA seq
DB search
MELSNNIATALMNSMKNASDWVTFAYDAPFARAVVFGVPIGGHLFVEGLLLVVILFLLSQ
KSYKPPKRPLTNKEIDELCDEWVPESLIPPMNEEMEKEAPVLESAAGPHTIINGKEVVNF
ASANYLGLMGDDKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIARFLGTPDSIL
YSYGLSTMFSAIPAFCKKGDVVIVDEGVHWGIQNGLYLSRSTIIYFKHNNMESLQTTLEK
VTQDNKRTKKLRRYIVVESVYQNSGQIAPLDEIIRLKEKYRFRVLLDESNSFGVLGGSGR
GLTEHYNVPVEKVDIITAAMGHALASEGGFCTGSNRVIDHQRLSSSGYVFSASLPPYLAS
AAITAIDVIEGNPKLLTNLRDNIKTLFTGLLGIQGLKLASDILSPIVFLVLKESTGSTKS
DLQLLQDIADRVLKEHSVFVVPSRRSTLDKCKLPVGIRLFVSAAHTESDLRKAYEALKAV
AASVLTPQN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagttatcaaacaacattgctacagccttgatgaattccatgaaaaatgcatctgat
tgggtgacatttgcatacgatgcgccttttgctagagctgttgtttttggagtccccatt
ggaggacatttgtttgtggaaggtctattacttgtagttattctcttcttactatctcaa
aagagttacaagccacctaaacgccctttaacaaataaggaaatagacgaattatgtgat
gaatgggtacccgagtctcttattccacctatgaatgaagagatggaaaaggaagctcca
gtattggagagtgctgcaggaccacatacaataataaatggtaaagaagtggtgaatttt
gcttctgcgaattaccttggattgatgggagatgacaagttacttgaatcatgtacctct
gctctcgagaaatacggtgttggttcctgtggtcctcgtggattttacggaacaattgat
gttcaccttgattgtgaagcaagaatagctaggtttctaggaactcctgattccatactt
tattcttatgggctttcgactatgttcagtgcaattccagcattttgcaagaaaggagat
gttgttattgtagatgaaggtgttcactggggcatacagaatgggttatatctatctaga
agtacaatcatatactttaagcacaacaacatggagtccttacaaactacacttgagaaa
gtcacccaagacaacaaacgaactaagaagttgagacgctacatcgtggttgaatctgtg
tatcagaattcgggtcaaatcgcaccacttgatgagataatcaggctgaaagagaagtac
agattccgtgttttattagatgaaagcaactcttttggggttcttggtggatctggtaga
ggtttaactgaacactacaatgtccccgttgagaaggtggatataattacagctgctatg
ggacatgcgttggcctcagaaggtggattctgtacaggaagtaatagagttatcgatcac
caacggctgagcagctctggttatgtgttctcggcttctctcccaccatacttagcaagt
gctgcaattactgcgattgatgtgatagaaggaaaccctaaacttctaacaaacttaagg
gacaacatcaagacattatttacagggttgttgggaatacaagggttaaaacttgcaagt
gatatactttcacctattgtgttcctagtattgaaggaatctacagggtctacaaagagt
gatcttcagttgcttcaggatattgctgatcgggtattgaaggaacattcggtttttgtg
gtaccttctagaagatctacacttgataaatgcaagctgcctgttgggattagattgttt
gtgtcggctgctcacacggaatctgatttaaggaaagcatatgaagcactgaaggctgtt
gctgcttcagtactcacgcctcaaaactga
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