Lactuca sativa (garden lettuce): 111881978
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Entry
111881978 CDS
T05352
Name
(RefSeq) probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
lsv04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111881978
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111881978
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111881978
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111881978
03036 Chromosome and associated proteins [BR:
lsv03036
]
111881978
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111881978
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111881978
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111881978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
SPARC_Ca_bdg
IGFBP
Motif
Other DBs
NCBI-GeneID:
111881978
NCBI-ProteinID:
XP_052620264
LinkDB
All DBs
Position
5:complement(134939631..134943878)
Genome browser
AA seq
480 aa
AA seq
DB search
MYSGSSDGEGLDASSVASRKIPPASSMLWVRNLRRFIGSGAGLGSEALMELETKRILLDI
FKEKQQKSAEAGSIPSFYKKKPEDGSISSRVQRLAKFRFLKKQSDLLLNADDLDAMWVCL
RENCVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKFEKDESGRIAILPF
YLYVMRTVSLTQARIDMSELDEDSDGFLLPHEMEAYIRGLIPNLAQLRDMPGAFVQMYCR
IAAPKFFFFCDPNRRGKACIKKVLLSNCLQELMELHQESEEEVTDTEQAENWFSMTSAQR
VCDMFLALDKDMNGTLSKQELREYADGTLTDIFIERAFDEHVRRGKTGRGNAREMDFESF
LDFVLALENKDTPEGITYLFRCLDLNGRGFLTTADIHTLFRDVHQKWIEGGNYELCIEDV
RDEIWDMVKPADPLRITLSDLLSCKQGGTVCSMLIDVRGFWAHDNRENLLQEEEEPEEES
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcggttccagtgatggggaaggtcttgatgcatcatcggtggcgtccaggaag
attccgccggcttcttcgatgctgtgggtccgtaacctccgccgtttcatcggatccggt
gctggtcttggctctgaagctttaatggagcttgaaacaaaaagaatcttgcttgatatc
tttaaagagaagcaacaaaagagtgctgaagctggctcaatcccaagtttctataagaag
aaacctgaagatggttccattagttctagagtccagaggttggcaaagtttcgtttttta
aagaaacaatctgatcttttactgaatgctgatgacctggatgccatgtgggtttgctta
agagaaaattgtgtcattgatgatgccactggtgcagagaagatgaactatgaagatttt
tgccacattgcctctgtatgcacagaacaaataggcccgaaatgtcgccgattttttagc
ccatcaaattttatgaaatttgaaaaagatgaatcaggaaggattgctattctgcctttt
tatctctatgtaatgcgcacggtttctcttactcaagcaagaattgatatgagtgagctt
gatgaggattctgatggttttcttctacctcatgaaatggaagcttatattcgaggtctt
attcctaatttggctcaattgcgtgatatgcctggagcttttgttcaaatgtattgccga
attgctgcacccaaattcttcttcttttgtgatcccaatagacgagggaaagcatgcata
aagaaggtgctgcttagtaactgtcttcaagagctaatggaactgcaccaggaaagtgaa
gaagaagttacagatactgaacaggctgaaaactggttttccatgacatctgcacagcgt
gtatgtgatatgttccttgcacttgataaagatatgaacggaacactgagcaagcaagag
cttcgagaatatgcagatgggacgctcacagatatttttatcgagagggcttttgatgag
catgtgcgtaggggtaaaacgggaagaggaaatgctcgggagatggactttgagagtttt
cttgactttgttctagcccttgaaaacaaagacactccagagggaattacatatctgttc
cgatgtttagatcttaatggaagaggcttccttacaacagctgatattcacacccttttc
agggatgtgcaccaaaaatggatagagggtggaaattatgagttgtgcatagaagacgta
cgggatgaaatatgggacatggtgaagccggcggacccactaagaatcacactctcggat
ttgttatcatgcaaacaaggtggaacggtttgcagtatgcttatagatgtacgtggtttt
tgggcacatgataacagagaaaaccttctacaagaagaggaagaaccagaagaagaatca
taa
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