Lactuca sativa (garden lettuce): 111881979
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Entry
111881979 CDS
T05352
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111881979
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111881979
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111881979
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
111881979
NCBI-ProteinID:
XP_023734120
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Position
5:complement(135019402..135023455)
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AA seq
734 aa
AA seq
DB search
MDFMKEKQVRFYTGENGKSNFEHSWQIPEKQIPEHKISSAPLLTNGAKSHMGVIKLGKSR
VHPEEATDLNGKRVLDPGSEVILQWNRMFLFSCLVALFVDPLFFYLPSVQINGGSSCMLS
DLNLGIVVTCLRTIADIFYMLHIFIKFRTAYVSPSSRVLGRGELVMDPEKIAKKYMKSDF
FIDLVATLPLPQIVIWFIIPAIRTQHADHTTNALVLIVLLQYIPRFYLIFPLSSQIIKAT
GVVTKTAWAGAAYNLVLYMLASHVLGASWYLLSFERHATCWKSTCRNDDVSIKCFLPYLD
CGSSNDDERIKWANGTNLFSICDPDNPQGFNYGIFGDAVSKGVVSSNFVEKYFYCLWWGL
QNLSSYGQNLSTSTYIGETSFAILIAIMGLVLFAHLIGNMQTYLQSITVRLEEWRLRRRD
TEEWMRHRQLPNDLQERVRKFVQYKWLATRGVDEESILRALPSDLRRDIQRHLCLDLVRR
VPFFSQMDDQLLDAICERLVSSLSTQGTFIVREGDPVSEMLFIIRGRLDSSTTNGGRTGF
FNSITLRPGDFCGEELLAWALHPKSTLNLPSSTRTVKALSEVEAFALRAEDLKFVANQFR
RLHSKKLQHTFRFYSYHWRTWAACFIQAAWRRIKKRRMAWNLSMSESSYRPDDDDHHHGY
DDDDERMHEMDHHEEAAAEAVYDRNPAKQNLNVTILASRFAANTRRGMLKTKDVELIKLQ
KPDEPDFSADPDDD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacttcatgaaagagaagcaagtcaggttttacaccggcgaaaatggaaagtcaaac
ttcgaacattcatggcaaatcccagaaaagcaaataccagaacacaagatttcatcagcc
ccattgctaacgaatggcgctaaaagtcatatgggtgttattaaattggggaaatcgaga
gttcacccagaagaagccaccgatttaaacggaaaaagggttttagatcctggaagcgaa
gtgatcttacaatggaacagaatgtttcttttctcttgtttagtcgcacttttcgttgat
cccttgtttttctacctcccttcagtacaaatcaatggtggttcttcatgtatgctgtct
gatttgaatttggggattgttgttacttgtttacgaacaattgcagatatattttacatg
ttgcacatatttataaagttcagaacagcttatgtgtctccaagttcacgtgttttagga
agaggtgaacttgttatggatcctgaaaaaatagcaaaaaagtacatgaagtcggatttc
ttcattgatcttgttgccactttgcctcttcctcagattgtgatatggtttattattccg
gctattagaacacaacatgctgatcataccacaaatgcccttgtgttaattgtgctcctt
caatatattccaagattctatcttatttttccattgagctctcaaatcattaaagctaca
ggagttgtcaccaaaactgcttgggctggagctgcatataatcttgtgttgtacatgtta
gctagtcatgttttaggggcatcatggtacttgttgtcttttgaaagacatgcaacatgt
tggaaatccacatgcagaaatgatgatgtttcaataaaatgttttcttccttatttggat
tgtggttcttcaaatgatgatgaaaggataaaatgggcaaatgggacaaatctttttagt
atttgtgatcctgataaccctcaaggttttaattatgggatatttggagatgctgtttca
aaaggtgttgtttcctctaactttgttgaaaagtacttctactgtttatggtggggttta
caaaatttgagttcatatggacagaatttgtccacaagcacatatattggagaaacatct
tttgccatactcattgccattatgggactcgtattatttgcccatttaattggaaatatg
cagacctacctacaatccatcaccgtaaggctcgaggagtggcggctgaggcggcgagac
actgaggaatggatgagacaccgccagctcccaaatgacttacaagaacgtgtccgcaag
ttcgtacagtataaatggctcgcaacacgcggagtcgatgaagaatctattttacgcgct
ttaccgtccgatcttcgtcgagacatccaacgccacttgtgtctcgatctcgttcgccgt
gtcccgtttttctcacaaatggatgatcaactacttgatgcgatatgcgagcgattagtc
tcgtcattaagcacccaaggcacgttcatagtacgtgaaggcgatccggtttcagaaatg
ctttttatcattcgggggagactcgatagttcaacaactaacggaggccgaactggtttt
ttcaattcgattactttacggccgggtgatttttgtggcgaagagttgcttgcgtgggcc
ctacacccgaaatcgaccctaaatttaccatcgtcaacgagaactgtaaaagccctaagc
gaagtggaagcgtttgcattacgcgccgaggatctaaagtttgttgctaatcagttccgg
cgattgcacagtaaaaaacttcaacacacgtttaggttttactcgtatcattggcggaca
tgggcggcttgttttattcaggcggcgtggcggcggattaagaagcggagaatggcgtgg
aatcttagtatgagtgaatcgtcgtataggcccgatgatgatgatcatcatcatggttat
gatgatgatgatgagcggatgcatgaaatggaccaccatgaggaggcggcagcggaggcg
gtgtatgatcggaatccggcgaagcagaatttgaatgttacgatattggcgtcgagattt
gcagcgaatacgaggcgagggatgttgaagacgaaggatgttgagttgattaagttacag
aagccggatgaacctgacttctcggccgatcctgatgacgattag
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