Lactuca sativa (garden lettuce): 111882100
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Entry
111882100 CDS
T05352
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111882100
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111882100
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
PRC2_EED_ins
Motif
Other DBs
NCBI-GeneID:
111882100
NCBI-ProteinID:
XP_023734232
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Position
4:191106586..191110003
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AA seq
619 aa
AA seq
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MAATQHQSTDHIIVPPNDSSITESLVMNAEEKLVQPDIIKEQDAAISYSRDNPSHSGALN
VAGDLTVYPPNLCAPLAHPMYYKGFENGSGKWDEYSPFINTETLDANGSPAMYTDNSVVF
HTGYGYNSQMPYGPYSPVTTPLPSVNGDAQLYPHPAQQYTFSGSPYYQHPVAPYTPVSQQ
PELKSLVSSEHGDGMVYGPRPGFSSPVGASVGRGDPPGRVGFQESLDAFRSRGGLWSDWS
GQSDRHRSFMPLSPSVSPHHTFGSFHQTFGSTSQQPPSFYGASSYDTTYLNNGLTPNPNH
AFATSSLSTPDVRPWPTLDNTRRRGGRGPASLCSCSSTLDILSEQNRGPRASRPKSLLPN
NNNNNNNNNNNNDNMMDASSQSLPDSVSEYTTEAKFFIIKSYSEDNVHKSIKYSIWASTS
NGNRKLDSAYREAKEKQTSVHVFLFFSVNASGQFCGVAEMLGGVDFDKSVDYWQQDKWSG
QFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKFEQGVEMLKIFNKYETDMSI
LDDFDFYEERQKAMQERKARQQQGNLGGGNENKNVNEFIRQMSKSFSEVVRLEDKDTSKS
TRVKLEKTAMSSPGVDTTD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacccaacatcaatccaccgatcacatcattgttcctccaaatgactcttct
attactgagtccttggtaatgaatgcagaggagaaactggtgcaacctgatatcattaaa
gaacaggatgctgcaatcagctattcaagggataatccaagccactcaggagccttgaat
gtagctggagatctcactgtctatcctcccaatctttgtgcccctttagcacatccaatg
tactacaaaggttttgaaaatggctcaggtaaatgggatgaatactctccattcatcaac
accgagacactggatgccaatggatctcctgcaatgtatacagacaattcggttgtgttc
cacacgggttatggctacaattcccaaatgccatatggtccatattctccagtgaccaca
cctctcccttctgttaatggtgatgctcagctatatccacatccagctcagcaatataca
ttctctggatcaccatattatcagcatcctgtggctccatacactccagtttcacaacag
ccagaattaaagtctttggtgagcagtgaacatggtgatggaatggtgtatgggccaaga
cctggtttctcatcaccagtaggtgcttctgttgggagaggtgatcctccagggagagtt
ggctttcaggaaagtctggatgcattcagaagcagaggaggactttggtctgattggtct
ggacaatcagacagacacagatcctttatgccattatcaccttctgtatctcctcatcat
acttttggatcttttcaccaaacctttggatctacatctcaacagccaccatcattctac
ggagcaagctcttacgacaccacctatttaaacaacggcctcactccaaatccaaaccac
gcctttgccacgtcatcactctccacgccagatgtacgaccatggcccactctggacaac
accagacgccgaggtggcaggggacccgcttctctttgcagttgtagttccactctcgat
attctcagtgaacaaaaccgtggtcccagagcctctagacctaaatcccttttacctaat
aacaataataataataataataataataataataatgataatatgatggatgcctcctcc
caaagcctcccggattctgtatcggaatacacaaccgaggctaaattcttcattatcaaa
tcctacagtgaagataatgtccataaatccatcaaatacagtatttgggcaagcacttcg
aatggaaacaggaagttagattctgcatatcgtgaagcaaaagagaagcaaacttctgtt
cacgtgtttctgtttttctcagtgaatgcaagtggacagttttgtggggtggctgaaatg
ctggggggtgttgactttgacaagagtgtggattactggcaacaggataaatggagtggc
cagtttccagttaagtggcatatcattaaagatgttcccaacagtcagtttcgccatata
gtacttgaaaataacgacaacaaacctgtcaccaatagtcgagatacacaggaggtgaaa
tttgagcaaggagttgaaatgttgaaaattttcaataagtatgaaactgatatgtcgatt
cttgatgactttgacttttatgaagaaagacagaaggcgatgcaagagcgaaaagcaaga
caacaacagggaaatttggggggtggaaatgaaaataaaaatgttaatgagtttatccga
cagatgtccaaaagtttctcggaggttgtccgcctggaagacaaagatacttccaagtca
acacgtgtaaaactcgaaaaaaccgccatgtcgtcgccaggtgtcgacaccacggattag
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