Lactuca sativa (garden lettuce): 111882208
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Entry
111882208 CDS
T05352
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111882208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111882208
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111882208
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
HECT type E3
111882208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
111882208
NCBI-ProteinID:
XP_023734328
LinkDB
All DBs
Position
6:121208016..121217504
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AA seq
1028 aa
AA seq
DB search
MFFSGDPSNRKRVDLGGRSSKERDRKKLLEQAKLERNKRSQQRQQNSAALTIQKCFRGRK
VVKLERGSARERFYTTYGKHCERVDRQCFGPDSEFLRELLYFLSPRNASDISTLVEACRL
FSQFAKESGDILNLFGGSHYSSDHALVNYRVKKLAYVCIQAIHHNRHQLKDQLLSTSLDS
NTPTSILLKAAALLIDPKLPWSCKIASYLLQQNIYKIFREIVITGRESLNSESRIGNVSL
MERVLAQVVTHTGQGHCVCPDIDLQWSFASQILTIPFLWQIFPHLKETYVSQGLCQYYLH
KMATCSQNYEKVLPVDISSEFPGYACLLGNLLESVGVALSRPSCSYNMTIDFATVATLLL
EALPPIQTSSTGNREENSIMGDDDMIIDDGSVVVPLNKELEKQISNAIDPRFLLQLTNIL
LGGSSSKDKIKDTEAAAVGAACSFLHVTFTIFPLERIMTVLAYRTELVSVLWSFMKRCYE
SQNWSSLSAMSAYLPGDAFGWLLPMAVFCPVYRHMLTIVDNEEFYEQEKPLSLKDIRLLI
VILRQSLWQILWLNPVAPMKFTKINLSLKKHRVEFVQYRVSVVASELLSQLQDWNNRRQF
AHPSNFHADGVNDHFISQAMIENTRAYDILKQAPFLVPFTSRVKLFTSQLAAIKERLGSH
SLFNRSTFKIRRDHILEDAFNQLSTLSEEDLRGVIRVTFVNEFGVEEAGIDGGGIFKDFM
ENITRAAFDMQYGLFKETIDHLLYPNPGSGMIHEQHLQFFHFLGIILGKAMFEGILVDIP
FATFFLSKLKQKHNYLNDLPSLDPELYRHLIFLKRYEGDLSELELYFVIVNNEFGEQTSE
ELIPGGKNIRVVNDNVITFIHLVANHRLNTQIRLQSSHFLRGFQQLIQKDWIDMFNEHEL
QLLISGSVDGFDVDDLRSNTNYAGGYHREHYVIDMFWEILKNFSLENQHKFLKFVTGCSR
GPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYRSKEHMEQKLLYAIN
AEAGFDLS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcagtggcgatccttccaatcggaaacgagttgatttaggcggtcgtagctca
aaggaaagagatagaaagaagcttttagagcaggcgaagttagagaggaataaaagatca
cagcagcgccagcaaaactcagctgctctcacaattcagaaatgctttagaggacgaaaa
gttgtgaaattggagcgtggtagtgcacgagagcgattttataccacttatggaaaacac
tgtgaaagagtagacaggcaatgctttggaccagattcagaatttcttcgggagttgcta
tattttcttagtccacgaaatgcttcagacatttctactcttgtggaggcatgccgtttg
ttttcacagtttgctaaagaaagtggggatattttgaacctttttggtggctcccactat
tcttctgatcatgctttggtgaactacagggtgaagaaacttgcttatgtctgtattcag
gctatacatcataatagacatcagttaaaggatcaattgttatcaacatctttggactca
aatacaccaacaagtatcttgttgaaagcagctgcattgttgattgatcccaagcttcca
tggtcttgtaagatagccagttatcttttgcaacaaaacatatataagattttccgggag
attgttatcacaggaagggaaagtttaaactctgaaagccgaattggaaatgtatcttta
atggagcgtgttcttgcccaagttgttactcatactggtcaagggcattgcgtttgtcca
gatattgaccttcaatggagttttgcatcccaaattctaacaattccttttctatggcag
atttttcctcacctaaaggagacttatgtttcacaggggctttgtcagtattatcttcat
aaaatggcaacatgtagtcagaattatgaaaaagtattacctgttgacatatcatctgag
ttccctggttatgcatgtcttcttggaaatttactggaatcagttggagttgctttgagt
cgcccttcatgttcttacaatatgaccatagactttgctactgttgcaacgttattgctg
gaggcacttcctcctattcaaacatcaagtacaggaaatagagaagaaaattcaataatg
ggtgatgatgatatgattattgatgatggatctgtagtagtacctcttaataaggaactg
gaaaagcagatttcaaatgcaatcgatccacgttttcttttacagctgacaaatattttg
cttggaggatcttcatctaaagataaaattaaggacactgaagcagcagctgttggtgca
gcttgttcttttcttcatgtgactttcaccatttttccacttgaacgtatcatgacagtt
ttagcttatagaactgaattggtatctgtactctggagtttcatgaagcgatgctatgag
agccaaaattggtcttccttgtctgccatgtcagcatatctacctggcgatgcatttggt
tggctacttcctatggcagttttctgccctgtgtacaggcacatgcttacaatcgttgac
aatgaggaattctatgagcaagaaaagccgttgtctttaaaggacattagattattgatt
gttatcttgagacagtctttgtggcagattctttggttaaaccctgtggcaccaatgaag
tttactaaaatcaatctttccttaaagaaacaccgtgtagaatttgttcagtatagggtt
agtgttgtggcttctgaacttctttctcagttgcaagattggaataatagaaggcagttt
gcacacccaagtaacttccatgctgatggtgtcaatgatcacttcatttctcaggcgatg
attgaaaacacaagggcatatgacatactgaaacaagctcctttcttggtgccatttaca
agcagagttaaattattcacatcacaacttgctgcaattaaagaaaggctagggtctcat
tctctttttaaccgaagtacttttaagataagacgtgatcatatattagaagatgctttt
aatcagttgagcacattatcagaagaggatcttcgtggagtgattcgggttacttttgtg
aatgaatttggagtggaggaggctggtattgatggtggtgggatttttaaagactttatg
gagaatattacccgagctgcttttgatatgcagtatggactatttaaggagacgattgac
cacctactgtatcctaatcctggatcaggaatgatacatgaacaacaccttcagtttttc
cattttcttggaattatactcggaaaggcaatgtttgaagggattcttgttgatatacca
tttgcaactttcttcttgagcaaactaaagcaaaagcacaactatttgaatgatttgcca
tctctggatcccgaattatataggcaccttatatttttaaagcgatatgagggtgatttg
tcagagttggagttgtactttgttattgttaataatgaatttggtgagcaaacatcagaa
gagctgattccaggtggaaagaatatacgagttgtgaatgataatgtcatcacatttatt
catcttgttgccaatcatcgcctcaatactcagattcgtctacaaagctctcatttctta
aggggatttcaacagcttatacagaaagattggattgacatgtttaatgaacatgaactt
cagcttctcatatcaggatctgttgatggattcgatgtagatgacttaaggtctaacaca
aattatgctggtggctatcatcgtgagcattatgtgattgacatgttttgggaaattctc
aagaacttctcattggaaaatcaacacaagtttttgaagtttgtgactggatgttcaaga
ggacctttgctaggattcaagtatttggaacctttattctgtatacagcgggctgctggt
agtgcctctgaagaagctcttgatcggttaccaacatcagctacttgtatgaatctttta
aagcttcctccatatagaagtaaagagcacatggagcagaagctgttgtatgctataaat
gcggaagcgggatttgatttaagctaa
DBGET
integrated database retrieval system
