Lactuca sativa (garden lettuce): 111882227
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Entry
111882227 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111882227
KO
K15199
general transcription factor 3C polypeptide 1
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111882227
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
111882227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6581
Homeodomain
Motif
Other DBs
NCBI-GeneID:
111882227
NCBI-ProteinID:
XP_023734355
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All DBs
Position
1:complement(46327269..46331442)
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AA seq
1190 aa
AA seq
DB search
MDRKTLERSLNKLQEDGHCKCISFAIPSATNCGRKRTVDVILHPSVYKSEDLSDTVHEKI
RSFEKLIRAQSFPRHTNGKSKSIPVLNNVERIPTKNDVQFQSETFIAMRENGFVLAKMVR
VKLLHVFLWGYLTLDRSREDDVYEGKNQYSSCKLFELDSAIKAMPLELFLQVAGSPVKLD
SMIEKCRNGIRLSDLPIQEYRSLMDTRATSRLSYLIDILRRLKLIRLIGGEFMETSVGPH
TTTTATLRHSLELKPYIEEPVTVVLPSPGVNSFDLRPHVRHDFVLGSRKGVEEYWNTLEY
CYSASDPKAALHAFPGSAVHEVFLSRSWAAVRVMTAHQRAELLKLVANDDSNQKISYKKC
EKIAEDLNLTLEQVLRVFYDKRQKHKLKGATSTKDPPTNALITYKRKRSSKGKGKTTLME
NLLEESSKVKHPKLFHEDNEISASRMDDMDAAADDDVALTEDEDGGQSYSVSKLQQPTRT
ERFPWTETTDRLLVIEYIRHRAALGAKFHRVEWSSLENLPAPPETCRRRMSALNRNNQFR
KAVMRLCNMLSVRYAKHLEYSKNKTLIHNRKPPDVVIHPSNELDVDEKWDDFDNKDIKIS
LDEVLQYKQISKSAATKGGSNCPRFNEFDQTASIPRDELLDSGRREASGRRSRRRYLPKS
YDNLMNRGKGFSTQTYKSLAVSNAIELFKLIFVSTAKAKAKAPAIPNLLAETLRRYSEHD
LFTAFNYLRDRKFMVRGNDASHFVLSQQFLHGISSSPFPVNTGKRAVKMARWIHEKEDDL
LEYGVNLPVDLQCGDVVHLCVLMCSGEVSLFPCLPDEGVGEIEELKKRKRECDDKQEQVC
VEKTKKPKILDSEIFSRKEKGFPGIQLCLNRSFISRVDAITFSRDGDTCSSVSNSSPSSV
HVASSESTWEAMSSYARHVASSGSFNPNMFQTVYSAIQKAGDQGLSMEGISQQEGGKMGE
VIVEVLEAFGRVLKVNAYDYVHVVDSMYRSKYLLASSMASHQHQHQHQHEHDLPHLKEPQ
TSSINDELQQENHTDDEVHRVTILNRPEPEENETNKNVKASCSGTGAEEGFCIGDGDGYK
PIVPWVNGDGSMNEIVYKGLVRRVLGIVMQNPGILEDQIISQMNVLNPQSCRKLLELMIL
DSHIRVRKMYASVSNEPPAMLRSLFGCSFNKPNLVFRQHFYANPTSIDCL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaagacattagaacgcagtttaaataagcttcaagaagacggacattgcaaa
tgcatttcgtttgcaatcccttctgccacaaactgtggtcgcaaacgtacagttgatgtg
atcctccatccatctgtatacaaatctgaagacctatcggatactgttcatgagaaaatt
aggtcatttgaaaagctaatacgcgcccaaagttttcccagacatacaaatggtaaatca
aaatcaatcccggttttaaataacgtggagagaattcctacaaaaaacgatgttcaattt
caatccgagacgtttatagcaatgagggaaaacggttttgttttggcaaaaatggttcgt
gtaaagctgcttcatgtttttctgtgggggtatctcactcttgatagatcaagagaagac
gatgtatatgaagggaagaaccagtatagtagttgcaaattgtttgaattagattcagcc
atcaaggccatgccacttgagttgttcttgcaggttgcagggtcccctgtaaaactcgat
tccatgattgagaaatgccggaatggaatacgtctttccgatcttccgattcaggagtat
aggtctctcatggatactcgagccacttcacgtctttcgtatcttattgacatcttaaga
cgcctgaagttgatacgattaattggtggagaatttatggagacttctgtgggcccacat
actactactactgctactcttagacattcgctagaacttaagccttacattgaggaacct
gtcacagttgttttgccatcgccaggtgtcaattcttttgatcttcgtcctcatgtcaga
catgattttgttcttggaagtagaaaaggtgttgaggaatactggaatactttggagtat
tgttattctgcttctgatccaaaagctgctttgcatgcattccctggatctgctgttcat
gaggtattcctttcacgttcatgggcagcagtccgagttatgacagctcatcagcgggct
gagctgttaaaacttgtggcaaatgacgactcaaatcaaaaaatatcatacaaaaagtgt
gagaagattgcagaggatcttaatttgaccttggaacaggtgcttcgtgtattctatgat
aagagacaaaagcataaactaaagggagcaacaagcaccaaagatccaccaacaaatgct
ttaattacttacaaaagaaaaaggtcatcgaaaggaaaaggaaagacaactttaatggaa
aatctacttgaagagtctagcaaagtgaagcatcccaaattgttccatgaagataatgaa
atttcagcgagtagaatggatgacatggatgctgctgctgatgatgacgtggcactaact
gaagatgaagacggtggtcagtcttactctgtgtcaaagctacagcagcctacacgtacg
gaaaggtttccatggacagaaacaacagacaggttgttggtgattgagtacataagacat
cgcgctgcactcggagcaaaatttcatcgtgtagaatggagctcacttgaaaatctccca
gcgcctcctgaaacatgcagaagaagaatgtcagctctgaacagaaacaatcagttcaga
aaagctgtaatgagactctgtaacatgcttagtgtcagatacgcaaagcatctagaatat
tccaagaacaaaacactcattcataatcgaaaacctcctgatgttgttattcatccttca
aatgagttggatgttgatgaaaaatgggatgattttgacaataaagatataaaaatatcc
ctagacgaggtccttcagtacaaacaaatttccaaatctgcagcaactaaaggtggatcc
aactgtcctcgattcaatgaatttgatcaaaccgcctccatacctagagacgagctttta
gatagtggaaggagggaagcttctggaagaagatcaagaagacgttatctgcctaaaagc
tatgacaatcttatgaacagaggaaaaggttttagtacacaaacctacaaatcattagca
gtttctaatgcaatcgagcttttcaagcttatatttgtaagcactgcaaaagcaaaagca
aaagctccagctatcccaaacctgttagctgaaacattgagacgatattcagaacatgat
ctttttacagcatttaattacctcagagacagaaaattcatggtcaggggtaatgatgcg
agtcattttgtactctcgcagcagtttttacatggtatttcatcttctccgtttcctgtt
aatactggaaaaagagctgtgaagatggcgaggtggattcatgaaaaagaagatgatttg
ttagagtatggagtaaatctacctgttgaccttcagtgtggtgatgttgttcatttatgt
gtgctgatgtgttcaggggaagtgtcgttgttcccttgtttgcctgatgaaggcgttggg
gagattgaggagttaaagaaacgtaaacgtgaatgtgatgataaacaagaacaagtgtgt
gttgaaaaaactaaaaagccgaaaatattagacagtgagattttttcacgtaaagaaaaa
ggttttccaggtattcagttatgtttaaaccgtagttttatttcaagagttgatgcaatt
acattctctagagacggagacacttgttcttctgtttccaattcatcaccttcttctgta
cacgtggcatcttctgagtcaacatgggaagctatgagtagctatgcaagacacgtggca
tcttctgggtcttttaatccgaatatgtttcaaactgtgtattcagccatccaaaaggct
ggtgaccaagggttaagcatggaaggtatctcccaacaagaagggggaaagatgggagaa
gttattgttgaggtgcttgaggcatttgggcgggttttaaaggtgaatgcttatgattat
gtccatgttgttgattccatgtatcgatcaaaataccttttggcctcctcaatggcatcc
catcaacaccaacaccaacaccaacatgaacatgatcttcctcatctgaaggagccacag
acctcctccattaatgatgagttacagcaagaaaatcatactgatgatgaggtgcacaga
gtcaccattttaaaccgcccagaaccagaagaaaacgaaacaaacaagaatgtgaaagca
agttgttcaggaacaggggcagaagagggattttgtattggtgatggtgatggttataag
ccaattgtgccttgggtaaatggagatgggagtatgaatgagattgtttacaagggactt
gtacgccgtgttcttggtattgtgatgcaaaatcctgggattttggaggaccaaatcata
agccagatgaatgttctaaatcctcagagctgtagaaagttattggagctgatgattctg
gatagtcatatcagggtgaggaagatgtatgcatctgtatcaaatgagcccccagccatg
ttacgctctctttttggttgcagttttaacaaaccaaatctggtttttagacaacatttt
tatgcaaaccctacaagtatcgactgtttgtag
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