Lactuca sativa (garden lettuce): 111882236
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Entry
111882236 CDS
T05352
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111882236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111882236
03036 Chromosome and associated proteins [BR:
lsv03036
]
111882236
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111882236
Coactivators
SAGA/TFTC/STAGA complex
111882236
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111882236
STAGA complex
111882236
TFTC complex
111882236
SAGA complex
111882236
SLIK complex
111882236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
111882236
NCBI-ProteinID:
XP_023734364
LinkDB
All DBs
Position
1:complement(46319048..46323802)
Genome browser
AA seq
611 aa
AA seq
DB search
MMADGSSSSPIQSTITNATTSMDQQQQQQQQQSISQNLPSSIDNTIGQIMSTPSLPSQQQ
QQQAPQVNSSNVLSQQQQQQQLLQQQQQQSNLMGTANFQIHQQGLQRSPSISRLNHMQQQ
QQQQQQYNMSANNAARIYGQMNFASGQQQMPQQQQNQQIGQIGNATLTRSGLMGQTGHMT
MLPGQAAAAAQLNLQSQLSASPRQKTGLVQGSQFHPGNTPGQSLQGMQMGMNMISPYNLN
SQIRANGSLAFSQQRINQGQMRPQLAQQNALASSQKLQAQGLSRTPFMNSQLSALSQNGQ
LAMMQNNLTQQQWSKQMPAMSAPNSPSYRLQQQRQQQQQQQALLGQQQQQQQQQQQLPSS
QMHNSMSLNQQQISQMVQQQQHQQQNQNQQQQPIGHQQNQQQLLQQQSPRIGGSAGQKSL
SLTGSQPDATASGTTTPGGSSSQGTEASNHLLGKRKIRDLVAQIDPNIVLDPELEEMLLM
LADDFIDSVTSFGAILAKHRNSSIVESKDVLLHLEKNYKLTIPGFSSEEKKQKKDNPPSD
LHKKRLDMIQGLMENTCSEANMNNNNNSKESTIPRNQFGGNMQQMRASASSEQLMIQSQN
KHLNKQGFDGY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggatgggtcatcgtcgtccccaattcaatcgaccatcaccaacgccaccaca
tccatggatcaacaacaacagcaacagcagcaacaatcgatttctcaaaacctcccttct
tcaatcgacaacaccattggtcaaatcatgtcaaccccatcattgccatcccagcaacaa
caacaacaagcaccacaagttaattcatccaacgttctatcgcaacagcagcaacaacaa
caattgcttcaacaacagcaacagcaaagtaatttgatggggacagccaatttccaaatt
catcaacaaggtttacagaggtctccatctatatcgcgtttgaatcacatgcaacagcag
cagcagcaacaacaacagtacaatatgagtgcgaataatgctgccagaatctatggacag
atgaattttgctagtgggcagcagcagatgccgcaacagcaacaaaatcaacaaattggt
cagataggaaacgccaccctaacccgctcaggcttgatgggtcaaaccggccacatgaca
atgttacccggtcaagctgccgctgctgcgcagcttaatctacaatcccaattatcagca
tcgcctaggcagaaaaccgggttagttcaagggtctcagtttcatccaggaaatacacca
gggcaatcactgcaaggaatgcaaatggggatgaacatgatcagcccctacaatttgaat
tctcaaattagggcaaatggttctcttgctttctctcaacaaaggataaaccagggccag
atgagaccacaattggcccaacaaaatgcactagcatctagtcagaaattgcaggcacag
ggcctatcacggaccccatttatgaactcacagctatcagcattaagtcaaaatggtcaa
ttagccatgatgcagaacaacctcacacaacaacaatggtcaaaacaaatgcctgccatg
tcagcacctaattctccttcatatcgccttcaacaacaaagacaacaacaacaacaacaa
caagcacttttgggacaacagcaacaacagcagcagcaacaacaacagcttccttcttct
caaatgcacaattccatgtccttaaatcagcaacaaatctcacaaatggttcaacaacaa
caacatcagcaacaaaatcagaatcaacaacagcaaccaattggacaccaacagaatcag
caacagcttttgcagcaacagtcaccgagaatcggaggatccgcgggtcaaaagtcttta
agtttgaccgggtcgcaacccgatgcaacagcttctgggacgacgacacctggcggaagt
tcaagccaggggacagaagctagcaaccatcttcttggtaaaaggaaaattcgagatttg
gttgcacaaattgatccaaatatagttttggaccccgaacttgaagaaatgcttttgatg
cttgctgatgattttattgattccgttacttcatttggagccatcttggccaagcaccgc
aactcttcaattgtagaatcaaaagatgtgttgctacacctagaaaagaactacaagttg
acaattcctgggttctcaagtgaagagaagaaacaaaaaaaagacaatccaccaagtgat
ttacacaagaagcgtctggatatgatacaagggctgatggagaacacatgttctgaagca
aatatgaataataataataattctaaagaatcaacgattccaagaaaccaatttggtgga
aatatgcagcagatgagggcttctgcaagttctgagcagttgatgattcaatctcaaaat
aagcatcttaataaacaaggctttgatggatattag
DBGET
integrated database retrieval system
