Lactuca sativa (garden lettuce): 111882327
Help
Entry
111882327 CDS
T05352
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111882327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111882327
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111882327
mRNA degradation factors
5'-3' decay
Lsm complex
111882327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
111882327
NCBI-ProteinID:
XP_023734459
LinkDB
All DBs
Position
1:46484634..46486441
Genome browser
AA seq
128 aa
AA seq
DB search
MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL
YCDISLGLYVIRGENVVLIGELDLEKEELPPHMTRVSDAEIKRAQKVERDATDLKGSMRK
RMEFLDMD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggcaggtccagaagatgtctatctatctacttctcttgcaagctatcttgac
aagaaacttctggtattgctaagagatggtaggaagctgttggggatacttcggtctttt
gatcaatttgctaatgctgttcttgaaggggcttgtgaacgagtaattgttggtgatcta
tattgtgatatctcactaggtctttatgtgatccgtggagagaatgttgttttgattggc
gagctggatctggagaaggaagaactccctcctcatatgacacgagtttctgatgctgag
ataaaaagggctcagaaagtggaaagggatgctacagatctgaagggttcaatgagaaaa
aggatggagtttcttgatatggactaa
DBGET
integrated database retrieval system