Lactuca sativa (garden lettuce): 111882359
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Entry
111882359 CDS
T05352
Symbol
LOC111882359
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111882359 (LOC111882359)
03041 Spliceosome [BR:
lsv03041
]
111882359 (LOC111882359)
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111882359 (LOC111882359)
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111882359 (LOC111882359)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
111882359
NCBI-ProteinID:
XP_023734490
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All DBs
Position
1:46582907..46586413
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AA seq
428 aa
AA seq
DB search
MQHQRLKQQQQQALMQHALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPNTCRSVYVGN
IHTQVTEPLLQEVFASTGPVEGCKLIRKDKSSYGFIHYFDRRSAALAIVSLNGRHLFGQP
IKVNWAYASGQREDTSGHYNIFVGDLSPEVTDAMLFACFSAYASCSDARVMWDQKTGRSR
GFGFVSFRDQQDAQSAINDLTGKWLGSRQIRCNWATKGAGTSDEKQASDSSKSVVELTNG
TSEDGKELGNSEAPENNPQYTTVFVGNLAPEVTQLELHRHFHSIGAGVIEEVRLQRDKGF
GFVRYSNHGEAALAIQMGNTQSVLYGKQIKCSWGSKPTPPGTSSNPLPEPAPAPMLSAVD
LLAYERQLAMSKMGLGVGGVHGPPMMGQHPFKQMGMGMGMGGAAGASQAIYDGGFQSIAA
AQQLMYYQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcagaggctgaagcaacaacagcaacaagcattgatgcagcacgctctcctt
caacaacaatctctttatcatcccggcctcttagctcctccccagattgagccaattcca
agcggaaatctgcctcctgggtttgatccaaatacatgccgcagtgtgtatgtgggtaat
attcatacacaagttactgaaccacttcttcaagaggttttcgcaagcactggtcctgtt
gaaggctgcaaactcataagaaaagataaatcatcttatggattcatccactactttgac
cgtagatcagctgcacttgctatagtatctctaaatggaaggcatctatttggacagcct
attaaagtcaattgggcatatgctagtggccagagggaggatacctcaggtcactacaat
atattcgtaggtgatcttagccctgaagttacagatgctatgctgtttgcttgcttctct
gcctatgctagttgctcggatgcaagggtaatgtgggaccaaaaaacgggtcgttcacga
ggttttgggtttgtttcttttcgtgatcaacaggatgctcaaagtgctataaatgactta
accggtaagtggcttgggagtaggcaaatacgctgcaactgggccacaaaaggtgctggt
actagtgatgaaaaacaagcttcagattcctccaaaagtgtagtcgagttaactaatgga
acttcagaggatggtaaagagcttggtaacagtgaagcacccgagaataacccacagtac
acaactgtttttgttggcaaccttgcccccgaagtgactcagcttgagcttcatcggcat
ttccattcgattggtgcgggtgtgattgaggaagtgagactgcaacgcgataaaggattt
ggttttgtgagatacagtaatcacggggaggccgctctcgctattcaaatgggtaacaca
cagtccgttttatatggtaaacaaattaagtgttcatggggaagcaagccgacgcctccg
gggacgagttcaaatccattaccagaaccggcacctgcaccgatgctatcggcggttgat
ttgttggcgtatgagcgacagctggcgatgagtaagatgggattgggtgtgggaggggtg
catggtccgcctatgatggggcagcatccttttaaacaaatgggaatgggaatgggaatg
ggtggtgctgccggagcaagtcaggccatatatgacggtggttttcagagcattgctgcc
gcccaacaactcatgtattatcagtga
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