KEGG   Lactuca sativa (garden lettuce): 111882470
Entry
111882470         CDS       T05352                                 
Name
(RefSeq) RING-H2 finger protein ATL78-like
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111882470
Enzymes [BR:lsv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111882470
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    111882470
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-C3HC4_3 zf-RING_5 zf-RING-like zf-RING_16 FANCL_C zf-RING_UBOX zf-RING_4 zf_RING_Vps8_fungal Prok-RING_1
Other DBs
NCBI-GeneID: 111882470
NCBI-ProteinID: XP_023734602
LinkDB
Position
4:291579973..291580845
AA seq 221 aa
MSRLSTELFENEMKHFISRKLLLDTYSYQQPTTAVRAPSPSSPHTEHSNFDANVVMVLSV
LICALICSLALNSIIRCVLRCTGSSESSDSQESTLVKANTGIKKKALKTFPTVSYWEGLK
LPGLDKECVICLGDFSTGELVKILPKCNHGFHVGCIDKWLSSHSSCPTCRNSLLETCQKI
VTGGNYSGIASSQPLEQGPRNTTILTILPVPHEGLVRNYET
NT seq 666 nt   +upstreamnt  +downstreamnt
atgtcaagactatctactgagctctttgagaatgaaatgaagcattttatttcaagaaaa
cttctacttgacacttattcataccaacaaccaacgactgctgtgagagctccatcaccg
tcaagcccacatacagaacatagcaactttgatgcgaatgtggtgatggtgctgtcggtg
ctgatatgcgctctgatttgctcactagcattgaactccatcatcaggtgtgtattaaga
tgtacgggtagttcagaaagcagcgatagccaggaaagtactttagttaaagccaacact
ggaatcaagaagaaagcattgaagaccttcccaacagtgagctattgggaaggactgaag
ctaccaggattggacaaggaatgtgtgatatgcttgggtgatttttcaacaggagagcta
gtaaaaatactgcccaagtgtaaccatggatttcatgtgggttgcatcgataaatggctg
agttcacattcatcttgtccaacttgcaggaactccttacttgaaacctgtcaaaagatc
gtcacaggtgggaattatagtggcattgcctcttcgcaacccctagagcaaggcccaaga
aatactactattctaaccatattgcctgtaccacatgaaggtcttgtacgaaattatgag
acgtaa

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