Lactuca sativa (garden lettuce): 111882520
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Entry
111882520 CDS
T05352
Name
(RefSeq) amino acid transporter AVT1C
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111882520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111882520
Transporters [BR:
lsv02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
111882520
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GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
111882520
NCBI-ProteinID:
XP_023734649
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Position
2:208341638..208346198
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AA seq
551 aa
AA seq
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MKNSVSDQAFFIESEDDEEDKDSIRGEDDGNDSEFSNYSDDNPQHQSKPSSLNPSWPQSY
RQSIDLYSSVPSPSLNFLGTPNLSRLGSSFLSSTLTRRHTPEILPSLTKPFLPPSTDNQQ
PQERRSSSHSLLPPRGSSAKKLPHYHKSSKASHELPLSRQSSYGQSVLNGINVLCGVGLL
STPFAVKEGGWVGLSLLFIFGVLSFYTGILLRYCLDSQPGLETYPDIGQAAFGTLGRLII
SIILYVELYACCVEYIILESDNLSSLFPNAHLNLGGYILNAHYLFAIMITLAVLPTVWLR
NMSVLSYISAGGVIASILVAICLFWVGLVDDVGFQIETTKTLNLSTFPVAIGLYGYCYSG
HAVFPNIYTSMAKRSQFPMVLLASFGSCAVLYAAVAIMGYMMFGESTESQYTLNLPTNLI
ASKVAVWTTVVNPFTKYALTISPVAMSLEELIPSNHMKSHVYSILIRTALVFSTLLVALS
IPFFGLVMSLIGSLLTMLVTLILPCVCFLSILKGKTTRFQVSVCVFIIVVGSVSSVIGTY
TALSEIIQQLF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattcagtatcagatcaagcctttttcatcgagagtgaagacgatgaggaagac
aaggactccattagaggtgaagacgatgggaatgattcggaattttcaaattattccgac
gataaccctcagcatcaaagcaaacctagttccttaaacccatcgtggcctcaaagttac
aggcaatcgatagatctgtacagcagcgtgccatccccgagcctgaactttctggggact
cccaacttgtctcgattaggcagttcattcctttcctcaacgctgacaagaagacacact
cctgagatactcccaagtttaaccaaacctttcttgccaccatcaacagacaaccagcag
ccacaagaaaggcgtagcagttctcattctcttcttcctccacgaggatcatctgctaag
aagttgccacattatcacaaatcttcaaaggcttcacatgaacttcctctttccaggcag
agctcttatggtcaatctgtgcttaatggcataaatgttctttgtggagttggacttctt
tcaactccttttgcagtgaaagaaggaggatgggtaggattgtcattattgttcatcttt
ggtgtcctttctttctacactggtatcctccttcgatactgcttagatagtcaacctggc
ctcgagacctatccagatattggccaggctgcctttggcactctcggacgtctcatcatt
tctataatattgtacgtggagttatacgcatgttgtgttgaatatattatcttggagagt
gataacctatcgtctctgtttccaaatgcgcatttaaacctcggaggatatatactaaac
gcgcattatttatttgcaattatgatcactctggctgtccttcccacagtttggctacgc
aacatgagtgttctcagttacatatctgctggtggagttatcgcgtcaattctagtggcg
atttgtttgttttgggttgggttagtggatgatgtggggtttcaaattgaaacgacaaaa
acgttaaacctctcgactttccctgttgccataggcctttatgggtactgttattcagga
catgcagtgtttcctaatatctatacatcaatggcaaaaagaagtcaatttccaatggta
ctcttagccagctttgggagctgtgctgttctttatgctgcagtggctataatgggatac
atgatgtttggtgaatcaacagaatcacaatataccctaaacctccccacaaatctgatt
gcctctaaagttgctgtctggactacggtggtcaacccatttaccaaatatgcgttgacc
atatctcctgtagctatgagccttgaggagttgataccatcaaaccatatgaagtctcat
gtctactccatcctcattagaacagcattagtcttctctactttgcttgtagccctctcc
atccccttctttggtcttgtgatgtcattgattggatctttactcactatgctagtgacg
ttgatacttccttgtgtttgctttttgagcattttaaagggaaaaacaactcgctttcag
gtatcagtgtgtgtattcatcattgttgttgggtctgtgtcttccgttattggaacctat
acagcgttatctgagataattcaacagttgttttga
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