Lactuca sativa (garden lettuce): 111882684
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Entry
111882684 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111882684 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111882684
Membrane trafficking [BR:
lsv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111882684
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
111882684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40
WDR55
WD40_Prp19
Synaptobrevin
Beta-prop_IFT140_1st
Lgl_C
RMC1_N
Beta-prop_EML
ATG16
Motif
Other DBs
NCBI-GeneID:
111882684
NCBI-ProteinID:
XP_023734818
LinkDB
All DBs
Position
9:complement(38362548..38368659)
Genome browser
AA seq
1097 aa
AA seq
DB search
MFAKKLLQKATKLHNLHHHHQNLRGSLTQEDLDFQLAVHYGIPSTASILAFDPIQRLLAI
GTLDGRIKVIGGDNIEGLLISPKQLPFKYLEFLSNKGFLVSISNDNDIQVWNLEDRSVAS
SLQWSSNITSFSLIHGSFFMYVGDEHGLMSVLKYEEDAELLMLPYHISAKSLTEAAGSSF
PDHWTVVGVLHQPCSSGNRVLIAYESGLIILWDVFESQVVVVRGDNVLELKNGVVDSSDQ
PEHNLEEKEITALCWASSNGSILAVGYIDGDIMFWKTSTTTSSKTQKSGASNNNVVRVQL
SSAERKLPVIVLHWSANSKSQNDSDGQLFVYGGDEIGSDEVLTVLSLEWSPGMETLRCVA
RAELTLIGSFADMSLLPNPINNLGTDLLVLTNPGHLQFFSHESLTALTSEHDKRITLNSI
ECPVVIPTLDPILTASSLSSLISTENTSNFLLEIATNMKVNSTSKFMNGSGNWPVSGGIV
QQLSSPEGYLIQRIYIAGYMDGSVRIWDATSSVLSILCVIREMKDVEVKVKGSTAPVSEL
NFCSLTSSLAVGNQLGLIRVYNLNSSSKDTTLHIITAIKQEVHKQAENGGPKCSACFHLL
DSPVRALQYMDHGAKLAVAHECGRVAVLDVKLFSVLFLSDSLPNPRSPVISMMWKSFLHN
DGYVKSPKDLGSKDLNKNKPVESLMFILTKDAKLYLFDCDDYRMINSKPMQLKKETTAIS
MHVIEGSTSMVESVDQKESKPLTKDVLARNEPSSPVDQKESKQLDSLVLLCCKDVLRLYR
LKSVIQGNEQTLCKVKLAKPCCWSSTFKKDEKTCGLVLLYQSGELEIRSLPDLEVVKVTS
LMSILRWSFKANMERTMSCTETGQISMINGSEVAFISLLNGGDDFRVLESLPCLHDKVLA
AAIEAVISSSQKQRKKQGTHGSIVNILKGFKGGKAKNGINFPADFLSSFRNLDKIFSKNP
FPDPVESITDDQEDVELDIDDIEIDEEPVSMPMPTTSSHSKQNEETGKKSDRERLFDGDN
SDATPRLRTREEIIATYRKAGDASSVASQARNKLLERQEKLERISRRAQDLNNEAEDFAS
LANELVKAMERRKWWQI
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaagaaactgttgcaaaaagctacgaagcttcacaatcttcatcatcatcat
cagaatttaagggggagcctcacacaagaagatttggattttcaattagcagtacattat
ggtatcccatctactgcatcgattcttgcctttgatcccattcagaggttattagccatt
gggacattggatggcagaataaaagtgattggtggggataacattgaaggacttctaatt
tctccaaagcaattacctttcaagtatttggagtttctatccaacaaagggtttttagtc
agcatatccaatgacaatgacatacaggtgtggaatttggaagatagatctgtagcctct
agtttgcaatggagctccaacattacaagtttttctttgatacatggctccttcttcatg
tatgttggagatgagcatgggttgatgtctgttttgaagtatgaggaagatgcagagctt
ttgatgctgccatatcatatttcagccaaatctcttactgaagcagctggatcatcattt
ccagatcattggactgttgttggagttcttcatcaaccatgttcttctggaaatagggtt
ttaatcgcatacgaaagtggattaatcattctttgggatgtctttgaatctcaagtggtt
gtagttagaggtgataatgttcttgaactaaagaatggagttgttgactcttctgatcaa
cctgaacacaatctggaggagaaagagataactgctctttgttgggcttcttctaatggc
agcattcttgctgttggatacatagatggagatatcatgttttggaaaacatcaactact
acttcaagtaaaacccaaaaatctggagcatcaaacaataatgttgtaagggtacaattg
tcatctgcagaaagaaaattacctgtaattgtcttgcactggtcagccaacagtaaatcc
caaaatgactctgatggtcaactctttgtttatggaggcgatgaaatagggtctgatgaa
gtattaactgttttgagtcttgaatggagccctgggatggaaaccctaagatgtgtagct
cgtgctgagcttactcttattggatcatttgctgatatgagtttgttaccaaatcctata
aacaaccttggaactgatttattagtactcacaaaccctgggcatcttcaattcttcagt
catgagagtttgactgcgttgacttctgaacatgataagagaattactctgaattctatc
gagtgtcctgtagtcatacctacacttgatcctatcctcactgcatcaagcctcagttca
cttatatccactgaaaacacttcaaacttccttttggagatagctacaaatatgaaagtt
aattcaacatcaaaatttatgaatggaagtggaaattggcctgtgtctggaggcattgta
caacagttgtcttctcctgaaggttatttaatacagagaatttacatagctggatacatg
gatggatctgttagaatatgggatgccacgtcatcggtcttatcaatattgtgtgttata
agggagatgaaagatgtggaagtgaaagtgaaagggtcaaccgctccagtttcagaattg
aacttttgctcattgacttcaagtttagcagttggaaatcaacttggtttgatccgtgta
tataacctcaattccagttcaaaagatacaaccctacacattatcacagcaataaaacaa
gaagttcacaaacaagctgaaaatggtgggcccaagtgtagtgcgtgtttccaccttctt
gattcccctgttcgagcacttcaatatatggaccatggagctaagctagcagttgcacat
gaatgtggtcgtgttgcagtgcttgatgtgaaattattctcggttttgttcctgagtgac
tctttacctaaccctagaagtccagtgatttccatgatgtggaaatcatttttgcataat
gatggatatgttaagagcccaaaagatttgggatcaaaggatcttaacaaaaacaaacct
gtagagagtttgatgttcatactcactaaggatgcaaagttgtatttatttgattgtgat
gattatcgcatgatcaactctaaaccaatgcaactgaaaaaggaaacaactgctatttca
atgcatgttatagaggggagtacttccatggttgaatcagttgaccaaaaggagtcaaag
ccgttgaccaaagatgttttagccagaaatgaaccatctagtccagttgaccaaaaggag
tcaaaacagctggattcacttgttttactttgttgcaaagatgtgttgcgtttatatcgt
ttaaaatctgtgattcaggggaacgaacaaactttgtgcaaagtaaaacttgcaaagcct
tgttgttggagttcaacttttaaaaaagatgaaaaaacttgtggattggtgttactctat
caatctggagaattagagatcagatcattgccagatctagaagtggtgaaagtaacctca
ttgatgtcgatattaaggtggagtttcaaagcaaacatggaaaggactatgagttgtaca
gaaactgggcagatttccatgataaatggatctgaagtggcgtttatctctctactaaat
ggtggtgatgatttcagggttttggaatctttgccttgtcttcatgataaagtgcttgca
gctgcaatagaggctgtgattagcagttctcaaaaacaaagaaaaaagcagggtacccat
ggatcaattgtgaatattctgaaaggatttaaaggaggaaaagcgaaaaatggcatcaac
tttcctgcagattttctatcgagttttcgtaatttggataaaatcttttcaaagaatcca
tttccagatccagttgaaagcattactgatgatcaggaagatgtggagcttgatatagat
gacattgaaattgatgaagaacctgtatccatgcctatgcctactacttcatcgcattca
aaacaaaatgaggaaactggaaagaaaagtgacagggaaagattatttgatggtgacaat
tctgatgccacaccccgacttaggacacgtgaagagatcattgctacatatagaaaggct
ggggatgcttcctcagtggcttcacaagcaagaaacaagcttttagaacgccaggagaag
cttgagagaatcagcagaagggcccaagatctaaacaatgaagccgaagactttgcatcc
ttagcaaatgagcttgtaaaggctatggaacgccgaaaatggtggcaaatatga
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