Lactuca sativa (garden lettuce): 111882790
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Entry
111882790 CDS
T05352
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
lsv04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111882790
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111882790
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111882790
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111882790
03036 Chromosome and associated proteins [BR:
lsv03036
]
111882790
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111882790
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111882790
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111882790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Maf1
HEAT_EF3_GNC1
Motif
Other DBs
NCBI-GeneID:
111882790
NCBI-ProteinID:
XP_023734925
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Position
8:complement(144207637..144211060)
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AA seq
557 aa
AA seq
DB search
MSIFVPENPDLYLGFRSGHPILRSLFGTLMNTHAVLEFACRPLDSRICLLLASNSTVSTM
IKQFLAKIPRKSSKSNTSDPDGGSSSSSITNDVSNNNGFLNTYNAISSRLNTVKKMSSSI
FPASIMPAGEMIDPRVPFKDVQNSDKLRLLISKLNLCSKLYDFSDQNQDSIEKDIKRQTL
SEIIDFLSSESPKLTEPAMFSICKMCGNNLFRDFPPKNSIFSQRGETEDEEPCFDPAWSH
LQLVYEILARFLTQTSLDPKIAKQYIDHSFILRLLDLFDTEDPRERDCLKAILHRVYGKF
MVHRPFIRMVVSNIIYRFVFETEKHNGIAELLEIFGSVISGFALPLKKEHKMFLLRALVP
LHKPKSVGVYHHQLTYCVVQFVEKEPKLSSDVIKGLLKFWPVTSSQKQLMFLSELEELLE
MIHTDEFEKIMVPLFRRINCCLRSSHFQVAERAHFLWNNEHILHLIMCNRQVIMPLVFSS
LEQNSQKHWSRTVVNLAQNMMKMLDDVDHELVVSCQGRMEEDKSTLTVAAERRRLTWERL
ESVSIMEETATTCVVSC
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtccattttcgtcccagaaaatccagatctttatttaggtttcagatctgggcatccc
attcttagatcccttttcggtactcttatgaatacacatgctgttcttgaatttgcttgt
cgcccattggattctcgtatatgcttattattggcttcaaattcaacagtttccactatg
atcaagcaatttctcgcaaaaatccctcggaagtcatcaaaatccaacacatcagatccc
gatgggggcagttcttcaagtagcataacaaatgacgtaagcaacaacaatggcttcctc
aacacatacaacgccatttcaagtcgattaaacaccgttaaaaaaatgtcttcctcgatt
ttcccagccagcatcatgccagctggcgaaatgatcgatccacgtgtccccttcaaagat
gtccaaaattccgataaactaagactactcatcagtaagttaaatctttgctcaaaatta
tatgatttcagtgatcaaaatcaagattctatcgagaaagacataaagcgacaaacttta
tcagaaatcatcgattttctctcatccgaatccccaaaactcaccgaacccgcgatgttt
tccatttgtaaaatgtgtgggaacaatctatttcgtgatttcccgccaaaaaattccatt
ttttcacaacgtggtgaaacggaagatgaagaaccgtgttttgatcccgcgtggtcgcat
ttacaacttgtgtatgagattctcgctcgatttctaacccaaacttccctcgatccaaaa
attgccaaacaatatatcgatcactcattcatattaagattactcgatctttttgacact
gaagatcctcgagaacgcgactgtttgaaagcgattttgcacagggtttatggtaaattc
atggttcatagaccctttattcggatggttgtgagcaatattatataccgatttgttttt
gaaactgaaaaacacaacgggattgctgaattgctggagatttttgggagtgtgattagt
gggtttgcgttaccattgaagaaagaacacaagatgtttttacttagggctcttgttcct
cttcataaaccgaaatctgtgggggtttatcatcatcagttgacttattgtgttgttcag
tttgtagagaaagaaccaaaattatcaagtgatgttataaaaggattattgaaattttgg
cctgttacaagtagtcaaaagcaattgatgttcttgagtgagttggaagagttgcttgaa
atgattcatacggatgagtttgagaagattatggttcctttgtttaggcgtataaattgc
tgtcttcgtagttctcattttcaggtggctgaacgagcacatttcttatggaacaacgaa
cacatactccatcttatcatgtgtaatcggcaggtgatcatgcctcttgttttttcctct
ttagaacaaaactcccaaaaacattggagcaggacagttgtcaaccttgcacaaaacatg
atgaaaatgttggacgatgttgaccatgagttggtggtgtcatgccaagggcggatggag
gaggacaagtcaacgttgaccgtggcggctgagcggcggcggttgacttgggagcgcctt
gaaagtgtttcaatcatggaagaaaccgctactacttgtgttgtttcttgctag
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