Lactuca sativa (garden lettuce): 111882866
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Entry
111882866 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111882866 isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111882866
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111882866
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
111882866
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111882866
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
KTI12
Zeta_toxin
AAA_17
6PF2K
SRP54
Motif
Other DBs
NCBI-GeneID:
111882866
NCBI-ProteinID:
XP_023735005
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All DBs
Position
1:complement(226261032..226265380)
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AA seq
566 aa
AA seq
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MASSMKRERSLADKNPSSGKKSRVNYGDHSLVGSSLHPITKHRVVLNPADCDLDFNIEGN
GLKGSALYENGFAYCWSGARATIGITRGKYCFSCKIVSNQPVEMDETTLDQKHLCRVGIS
NATNKVGNLGETEHSFGFGGTGKFSNFGKFSSYGERFNIGDTILCAVDMESKPMCSIGFA
KNGKWLGIAGYFNGGGVESYFPHVLLKNVVVEMQFGCEDGLIPLHGYRPWACAFEDGNGL
VGPTFSNVCECELIMMVGLPASGKTTWAEKWANDHPDKRYILLGTNLALDQMKVPGLLRK
QNYGKRFDHLMEHATDIFNTLLTRASKTPRNFIIDQTNVYKSARKRKLKPFANFQKIAVV
VFPRLEELKARSEKSFRELGKEVPVEAVNQMLANFVLPKTKDMHGTDEYFDQVIYIELNM
MESNRCLDEMKAKLQSTTTISPYSSHKSSNPVSSYPQEHVMRPHRISTHQNPLQSHLTSL
QNQGGSYSYPSQTTLPNRGSNNRFVPRDDLNHRRSYSGYEHRASSAPMGMGISVFSQKNS
YHHTYTSTPTQETMDISPRYSTPHLN
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcgatgaagcgggaacgctctttagcagacaaaaacccttcgtcggggaag
aaatcaagagtcaattacggtgatcattcgcttgtcggatcttcgctacacccgatcacc
aaacatcgagtcgttcttaaccctgcagattgtgatctagatttcaatattgaaggaaat
ggtcttaaaggctcagcactttatgagaacggatttgcttattgctggtccggggcccgc
gccaccataggcataaccagaggaaagtattgctttagttgcaaaatagtctcaaaccaa
cctgttgaaatggacgaaactacccttgaccaaaaacacctctgtcgtgtgggcatctct
aatgcaaccaacaaagtaggaaacttaggggaaaccgagcatagtttcgggttcggtgga
acaggaaagttttctaattttggaaagttttcatcttatggagaaagattcaatattgga
gacacaattctttgtgcagtagatatggaaagtaaaccaatgtgtagtattggatttgcc
aagaatggaaagtggttggggatcgcagggtattttaatggaggaggggtagaatcgtac
tttccacatgtgttgttgaaaaacgttgtggttgagatgcagtttggttgtgaagatggt
ttgattccattacatgggtatagaccatgggcatgtgcttttgaggatggaaatggattg
gtgggacccacgttttctaatgtgtgtgagtgtgaattgattatgatggttggattgcct
gcttctgggaagacaacttgggctgaaaaatgggcgaatgatcaccctgataaaagatat
attcttcttggaacaaatttggctcttgatcaaatgaaggttcctggtttacttcggaag
caaaactatgggaagaggtttgatcacttaatggagcatgcaactgatatatttaataca
ttgttaacaagggcttccaaaacaccaagaaatttcattatagatcaaacaaatgtctac
aaaagtgctcgaaagcgcaaattgaagccttttgcaaactttcagaagattgcagttgtg
gttttcccaaggctggaagaacttaaagctcgcagtgagaaaagttttagagaattggga
aaggaagttcctgttgaagctgttaatcaaatgctagccaattttgttttgcctaagacc
aaggatatgcatggaactgatgagtattttgatcaggtcatatacatagaactcaacatg
atggaatcaaacagatgcttagatgaaatgaaagcaaaactacaatccaccactactatc
tctccttattcttctcataaaagcagcaatcctgtaagcagctatccacaggagcatgtc
atgcggcctcacagaatctcaacacatcaaaatcctcttcaaagtcatttaacttcgttg
caaaatcaaggaggatcttattcgtatccatctcaaactacattgcctaataggggaagc
aacaacagatttgtacctagagatgatctgaatcaccgccgtagttacagtgggtatgag
cacagagcatcatccgcccccatgggtatgggtatttctgtcttttctcaaaaaaactca
taccaccatacttatacttccactcccacccaagaaaccatggatatatctcctcgctac
tctaccccacacctcaactaa
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