Lactuca sativa (garden lettuce): 111882963 Help Entry 111882963         CDS       T05352                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism lsv  Lactuca sativa (garden lettuce) Pathway lsv04120   Ubiquitin mediated proteolysis lsv04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:lsv00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     111882963  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     111882963  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:lsv04121]     111882963 Enzymes [BR:lsv01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      111882963 Ubiquitin system [BR:lsv04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     111882963   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      111882963 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 Beta-prop_DCAF4 EIF3I WD40_MABP1-WDR62_1st zf-C3HC4_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4 Beta-prop_WDR90_POC16_2nd Beta-prop_EML zf-C3HC4_3 WD40_RFWD3 WD40_like zf-RING_2 Beta-prop_WDR75_1st zf-C3HC4_4 zf-RING_UBOX Beta-prop_DCAF12 U-box zf-RING_5 RING_XB3-XBAT31 zf-RING_10 zf-RING_6 zf-rbx1 Prok-RING_4 Motif Other DBs NCBI-GeneID:  111882963 NCBI-ProteinID:  XP_023735093 LinkDB All DBs Position 4:complement(101567687..101573307) Genome browser AA seq 684 aa AA seqDB search MAMGGGSVAGVIVPSVKSEPPEPATEGLASSSPLLPVAQEPQSQLPAPDSAVAVMEVDAR GNDREAVDAASLDKDVLCPICMQIIKDAFLTSCGHNFCYMCIATHLQNKSDCPCCAQYLT TSQIFPNFLLNKLLMKASACQIAKAASPVEQVRLAFQQGCDVSMKELDSLIVVLTDKKKR MEQEEAESNLQIMHEFLYCLRRQKLEELNEIQKDLGYIKEDINAVERHRIELHRARERCS VKLRMLADDSSVKTSWPSLMDKRNGSSIGTQNRLPDLQATTTNSLSLQKKDSDSQNTQVG STVARKRRVHAQFNDLQECYLQKRRHWEKQAHKQEEREGRNVKGEGYHDGLKDFQSVLST FTRYSRLRVIAELRHGDLFHSADIISSIEFDRDNELFATAGVSRRIKVFEFASVVNEQAD VQCPVVEMSTRSKLSCLSWNKYTKNYIASSDYEGIVTVWDVTTRQSVMEYEEHEKRAWSL DFSRTEPTMLVSGSDDCKVKIWCTRQEASVLNIDMKANICSVKYNPGSSFHVAVGSADHQ IHYYDLRKINQPLHIFNGHRKAVSYVKFLSNHELSSASTDSTLRLWDVKQNIPLRTFRGH VNEKNFVGLTVNSEYIACGSETNEVFVYHKAISRPAASHGFSSDATDGEEAGSYFTSAVC WKNDSPTMITANSRGTIKVLVLAE NT seq 2055 nt NT seq  +upstreamnt  +downstreamnt atggcgatgggaggtggttcagtagcaggagtgattgtgccgtcggtgaagtcggaaccg cctgaaccggcaacggagggactcgcatcttcttctccattactgccggtggctcaggaa cctcagtcgcagcttccggcaccggattccgctgtggccgtgatggaggtggatgcaagg ggaaatgatcgtgaggctgtagatgcggcatcgctggataaagatgtcttgtgtccgata tgcatgcagatcattaaggatgcgtttttgacatcgtgtggtcataacttctgttacatg tgcattgctacacatcttcagaataagagcgattgtccttgttgtgcgcagtatctcacc actagtcagatatttcctaattttttgcttaataagctattgatgaaggcttcagcttgt caaatagcaaaagctgcttctcctgttgaacaagtccggctagcatttcaacagggatgt gatgtgtcaatgaaggagctggacagcctcatagttgttctcactgacaagaaaaaaaga atggagcaagaagaagctgagtcaaatctgcaaattatgcatgagtttttatactgctta agaagacaaaaacttgaagagctaaatgagatacaaaaagatctcgggtacattaaggaa gacataaatgcagttgaaagacacagaatagaattacatagagcaagagaaagatgctca gtaaaactaaggatgcttgctgatgattccagtgttaaaacttcatggccatcattgatg gataaacgtaatggcagcagtataggtacacaaaataggttacctgatttacaagctact actacaaactctctatcactccaaaaaaaagattcagattcacaaaatactcaagtagga tcaactgtagcaagaaaaagacgcgtccatgcacagtttaatgatttgcaagagtgttat ctgcaaaagcggagacattgggaaaaacaagcacataagcaggaagaaagggaagggcga aatgtgaaaggagaaggttatcatgatggacttaaggactttcagtctgtgctttctaca tttacacgatacagtcgattgcgagtcattgctgagttgaggcatggggatcttttccac tcggctgatattatatcaagcatagaatttgaccgagacaatgagctttttgctacagct ggagtttcacgacgcatcaaagtgtttgagtttgcctcagtggtgaatgaacaagctgat gttcagtgtcctgtggtggaaatgtcaacgcgctccaaactcagctgtttgagctggaac aaatacaccaaaaattacatcgccagtagtgactacgagggtattgtcactgtctgggat gtaaccactcgccagagtgtaatggagtatgaggagcatgagaaacgagcatggagtctt gatttttcacgtactgaacctacaatgctagtatctggaagcgatgattgtaaggtcaag atatggtgtacaagacaagaggcaagtgtccttaacattgacatgaaagcaaatatttgc tccgtgaagtataatcctgggtctagcttccatgttgcagtgggttctgcagatcatcaa atacattattatgacttgagaaaaataaaccaaccgttgcatatttttaatgggcatcga aaagccgtttcatatgtaaaattcctgtccaatcatgaactttcttctgcatctacagac agcacgttgcgcttgtgggacgtcaagcagaatatcccacttcgcacatttagaggacac gtgaacgagaagaattttgtgggtctaactgtaaatagcgaatatattgcatgtggcagc gagacaaatgaagtctttgtgtaccataaggctatttcgagaccagcagcttcacatgga tttagttcggatgcaacggatggagaggaggcggggtcgtacttcacaagtgcggtttgt tggaaaaacgatagccccacaatgataactgcaaacagtcgtggaaccattaaagttctt gttctcgctgaatag

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