Lactuca sativa (garden lettuce): 111883049
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Entry
111883049 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111883049 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111883049
Enzymes [BR:
lsv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
111883049
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111883049
Prokaryotic type
111883049
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
111883049
NCBI-ProteinID:
XP_023735178
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Position
4:405868965..405872286
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AA seq
514 aa
AA seq
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MAKLCCISRASSLIFFLPRPNFTFRSALFCKPFISQSLHSYSTTKTPFPLQYEMIITRPP
QTTPLHHPRRRRAPALPNSKPPDTDVGFDDWVDMKLTSESAPSLTTSNQDQKQPVLLNDE
MDKSKRKYYNKRQKRMYGSDSEDDDGKHENKYIELNQEVVKLRTLHKREEELYFYDAFAY
PWEKDKHYKMVYQLEKKFFPDQCFDKAFLEPGQSNEEKKKKRVAVKGVGEKKDDKGLVFF
EEEKVNKDVKMDITEKKVEEFFKCLKKVPNEVDNTLPFISGRSSGLPPKWDGPTGAVLLV
NKPKGWTSFTVCGKLRRLVNVKKVGHAGTLDPMATGLLIVCIGKATKLVDRFQGMVKGYS
GVLRLGEATSTLDADSPVIQREPWEHIKDDDIKKSAASFCGEIWQVPPMFSAIKVGGERL
YEKARRGESIELSPRRISIFQFDVERSLEDRQNVIFRVTCSKGTYIRSLCADFAKALNSC
AHMTALRRDSIGEYSVDDAWDFEELEKEIPKNYM
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaattgtgttgcataagccgcgcatcatctcttatcttcttcctccctcgaccc
aacttcacttttcgttcagcactattctgcaagcctttcatatcacaatccttacattca
tattccaccaccaaaactccattcccactccaatacgaaatgataatcacccgcccacct
caaactacacccctccaccaccctcgccgccgccgagcaccagcgctcccgaattccaaa
cctccagataccgacgtgggttttgatgactgggttgatatgaaattaacttcagaatca
gcaccctcgttaaccacatcaaatcaagatcaaaagcaacccgtcttgttgaatgatgag
atggacaaatctaaaaggaagtattacaacaagagacaaaagagaatgtatggttcggat
tcagaagatgatgatggtaagcatgagaataagtacattgagttaaatcaagaagttgtt
aagttacgcacattgcataaaagagaagaggaattgtatttctacgatgctttcgcatat
ccatgggaaaaagataagcattataagatggtgtatcagttggagaagaaatttttccct
gatcaatgttttgacaaggcgtttcttgaaccaggtcaatcgaatgaggagaagaagaag
aagagggttgcagttaagggtgttggggagaagaaagatgataagggattggtattcttt
gaggaggagaaagtgaacaaagatgtgaaaatggatatcacagagaagaaagttgaggag
ttcttcaagtgtttgaagaaagtccccaatgaagttgataacacactacccttcatctca
ggtcgaagttcagggcttcctcctaaatgggatggtccaactggagctgttcttttggtt
aacaaacctaaaggatggacttcatttacagtttgtgggaagttgaggcgacttgtcaat
gtaaaaaaggttgggcatgcggggacccttgatcctatggcaactggtttgcttattgta
tgtattggcaaagcaacaaagttggttgatagatttcagggtatggttaaaggttatagt
ggagttcttcgtttaggagaagctacctcaacccttgatgctgactcaccggtgatacaa
cgtgagccatgggagcacataaaggatgatgatataaagaaaagtgcagcatcattttgt
ggggaaatatggcaagtccctccaatgttttcagccatcaaagttggaggtgagaggtta
tatgagaaagcaagaagaggagaaagcattgaactttcaccaagaagaatatcaattttc
cagtttgatgttgaacgaagtctagaagatagacaaaatgtgatttttagggtgacatgt
tcaaaagggacatatattcgatccctatgtgcagattttgcaaaggctctcaacagttgt
gctcatatgactgctctacgaagagattccattggggaatattcggtagatgatgcctgg
gattttgaggagttagagaaagaaattcccaaaaattatatgtag
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