KEGG   Lactuca sativa (garden lettuce): 111883084
Entry
111883084         CDS       T05352                                 
Name
(RefSeq) polygalacturonase At1g48100
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv00040  Pentose and glucuronate interconversions
lsv01100  Metabolic pathways
Module
lsv_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    111883084
Enzymes [BR:lsv01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     111883084
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix
Other DBs
NCBI-GeneID: 111883084
NCBI-ProteinID: XP_023735220
LinkDB
Position
4:complement(404548014..404550262)
AA seq 461 aa
MPSLTSITRRNMKSQNTKICIYGIFTFVLLWSSKLGANASREAKQWRHHGGSRQLLRETF
YPSYGESMPNSFQYRKTSTIFNVLNFGAKGDGTSDDTKAFEAAWFAACKLEASTMVVPKG
SVFLIKPISFSGPDCQPNIIFQLDGKIIAPKASGSWESGLLQWLEFTKLNGITIRGTGIV
DGQGSGWWTKSGTKPTAIRFYGSSDVTVTGITIQNSPQTHLKFDNCQSVQVSDITVSSPG
DSPNTDGIHLQNSQDVTIQSSKLACGDDCVSIQTGCSAVNIQNVDCGPGHGISIGSLGED
NTKACVSNITVLDTKIHDAMNGVRIKTWQGGSGSVQGVVFSNIQLSQVKTAIVIDQYYCD
GSKCKNDTSAVAVSGISFENIRGTYTVNPVKFACSDSLPCTDITLDTIQLRPVQGSDHLS
KPFCSNIYGELKTSTTPPIDCLMVGKPSRKQALNNYDSCQN
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgccctctttaacctctataacaagaagaaacatgaagagccagaatacgaagatctgc
atatatggcatcttcacatttgtacttctgtggtcatcgaaacttggggccaatgccagt
agagaggccaagcaatggcggcaccacggtggctcaaggcagctgctgagagagacgttt
tacccttcgtatggagaaagcatgccgaattcatttcagtataggaaaacctctaccatc
tttaacgtattaaacttcggtgctaaaggtgatgggacaagtgatgatacaaaggcattt
gaagcagcatggtttgctgcttgtaagctagaggcatcaaccatggttgttcccaaaggt
tcagtctttttgatcaaacccatatctttctctggacccgattgtcaaccaaacattatc
tttcagttagatggcaagattatagctccaaaagcctcaggaagttgggaatcaggcctc
cttcaatggctggaattcacaaagctaaatgggatcacaatccgtggaaccggtatagtt
gatggtcaaggctccggttggtggacgaaatcgggaactaaaccaacagctataaggttt
tatggaagttctgatgtgacagtgacgggcataacgatacaaaacagcccacaaactcac
ctcaagtttgataactgtcaatccgttcaggtttccgatattacagtttcctccccaggc
gacagtccaaatacagacggaattcacttgcaaaactctcaagatgtaacgatccaaagc
agtaaactcgcttgtggtgatgattgtgtttccatacaaaccggttgttcagcagtaaac
attcaaaatgtggattgtggacctggccatggaataagcatagggagccttggtgaagat
aatacgaaggcttgtgtttcaaatataactgttcttgatacaaagatccatgacgcaatg
aatggtgtacgaataaagacatggcagggaggctcgggctccgtgcaaggagtggtattt
tcgaacattcaactttctcaagtcaaaactgcaatcgtaattgatcaatactattgtgat
gggagcaaatgcaagaacgatacatcagctgtggctgtttcagggatatcatttgagaac
ataagagggacgtatactgtaaaccctgttaaatttgcatgcagcgatagcttgccatgt
acagatataactttagacactatacaattacgaccagtacaaggaagtgatcatttaagc
aaaccattttgttccaacatctatggagaacttaaaacaagcaccaccccaccaatcgat
tgcttgatggttggaaaaccatcaagaaaacaagctctaaataactacgattcttgccag
aattga

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