KEGG   Lactuca sativa (garden lettuce): 111883374
Entry
111883374         CDS       T05352                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111883374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111883374
   03041 Spliceosome [BR:lsv03041]
    111883374
Messenger RNA biogenesis [BR:lsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111883374
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111883374
Spliceosome [BR:lsv03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111883374
SSDB
Motif
Pfam: RRM_1 RRM_7 Monellin
Other DBs
NCBI-GeneID: 111883374
NCBI-ProteinID: XP_023735466
LinkDB
Position
2:complement(153327449..153329496)
AA seq 427 aa
MVKTAANKQKPAKKPLNANKKKFVKTKKKKNVAEKSIISNTSASQAAETSSDSDVEENSP
EQIQKLIEPYTKDQLIEILINAAIANPSLYTRIRDAADSDESHRKIFVYGLGWDTTKETL
TLAFQPYGEIEDCNVVIDRVTGKAKGFGFVQFRSRKGAMKALKEPKKKINNRMASCQLAS
LGSAIAGSTDNASRKIYVSNVQPDADAERLRAFFSKFGEIETGPLGFNSSTGKSRGFALF
VYKTQEGFRKALEEPYKVFEGHKLHCQKAADGKNKGVATSSPATVTTPVVQQPTPQMMAA
VAATQNFGMFNQSLGLNPMYGGLFSNQNAGFLAANPLYASGVLGQLGAAIGGAQPGLGSY
YGGAPMGVDNTSLLGATPPMLQGVGLLNAYPKKKVGSAALTSGSGSASGSRSQGGGGGSF
GGYQSHS
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggtgaaaaccgcagcgaataagcaaaagccggccaagaaaccattaaacgccaacaag
aagaagttcgtaaagacaaagaagaagaaaaatgttgcagaaaaatcgatcatctcaaac
acatcagctagtcaagctgccgagacatcttcggattctgatgtggaagaaaactcacct
gaacagatccagaagctcatcgaaccatacactaaggaccagttaatcgaaattctcatc
aacgccgccatagcaaacccttcgctttacacccgaattcgtgacgccgccgacagtgac
gagtcccaccggaagatattcgtctacggccttggctgggacactactaaggaaacccta
actctcgccttccaaccgtacggcgaaatcgaggattgtaacgtcgtcattgaccgtgtc
actgggaaagcgaagggctttgggttcgttcaatttaggtcacggaaaggggcaatgaaa
gctctcaaagaaccaaagaagaagattaacaaccgaatggcgtcgtgtcagttggcatca
ttagggtctgcaatcgccggctccacggacaacgccagtaggaagatttatgttagtaac
gttcaacccgatgccgatgcagagcgattacgagcattcttctccaaatttggggaaatc
gagacaggtccattagggtttaattcgtcaacaggaaagtcacgtggctttgctttgttt
gtgtataagactcaagaagggtttagaaaggctttagaagagccttacaaagtattcgaa
ggacataaattgcattgccagaaggcagccgacgggaaaaacaagggagttgcaacttca
tctccggcgactgtaaccacacctgttgtccaacaacctacccctcaaatgatggctgct
gttgctgcgactcaaaattttggaatgttcaatcaatctctgggattgaaccctatgtat
ggaggtttgttttcaaatcaaaacgcagggtttctcgcagcaaatcctctttatgcttca
ggggttttggggcaactgggtgctgctattggtggcgcacaacccgggttaggtagttac
tatggtggtgcacccatgggtgttgataatacgtcattgctaggggctactcctccaatg
ctacagggtgtaggcctactaaatgcctacccgaagaagaaagtaggatcagctgctttg
acttcaggttcaggttcagcttctggttccaggtctcaaggtggtggtggtggctctttc
ggtggttatcaatctcactcgtga

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