Lactuca sativa (garden lettuce): 111883603
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Entry
111883603 CDS
T05352
Name
(RefSeq) protein argonaute PNH1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111883603
03036 Chromosome and associated proteins [BR:
lsv03036
]
111883603
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111883603
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111883603
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111883603
microRNA pathway
RISC loading complex
111883603
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
111883603
NCBI-ProteinID:
XP_023735697
LinkDB
All DBs
Position
8:86076993..86091468
Genome browser
AA seq
907 aa
AA seq
DB search
MPQLKQIRDPEEKHMISKRRNGRRKGKGKMLERTPLMLQDSTAEISSEKKLMFHRRPGFG
QLGTKCVVKANHFLADLVDKDLTQYSVKMIPEVNSTKLNKAIMSQLVKVHRHKDLGMKLP
VYDGRRALYTAGKLPFISKEFTVTIMDDLDWIGITKEREFTVTIEIVAHASMCQLRELLS
GKQVESPLEALKIVDLVLKELTAQRYISVGRFFYSPNITNPKSIGCGLQSWRGFYQSIKP
TQMGLSLNIDTLATTFIEPLPVIEFVAQILGKQVYTKQISDADRIKIKKALRGVKVEVTH
RGNVRRKYRISGVTSQPTRELMFPVDEERNMKSVVDYFREVYGFTIQHPHLPCLQVGNQK
KVNYMPMEACKIVEGQRRTKGLNNKQITSLLKFSCQRPKEQEKEILQTMHQSCFKEDPYL
KEFGITIDDKLTSVDARVLPAPWLKYHDSGKQKEVLPQMGQWNMKDKKVINGSVVNYWAC
INFSRTVPDSAAQSFCHQLVQMCQESGMEFKSDSVVPVYSARPDQVKKALKHVYTATVNK
LGGKELELLIAILPDNNGSLYGDVKRICETDLGLISQCCLTKYVLKISKQYLSNVSLKIN
VKLGGRNTVLLDALRWKVPLVSDIPTIIFGADVTHPESGEDSNPSIAAVVASQDWPEVTK
YAGLVSAQPHRQELIQDLYKTWQDPQRGKVNGGMIRELLLSFEKATGKKPLRIIFYRDGV
SDGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFPNNHNDRKSTDKSGN
ILPGTVVDTKICHPVEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYT
YARCTRSVSVVPPAYYAHLAAYRARFYMEPEVHHENGSAHSMCMVKSAGVRPLPALKDKV
KKVMFYC
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagttgaagcaaattagagacccggaggaaaagcatatgatttcaaagagaaga
aatggaagaagaaaagggaaaggaaaaatgttggaaagaacgccattgatgttacaagat
tcaacggctgagatttcttctgaaaagaagctcatgtttcatcgaagacctggttttggt
caactgggtactaagtgtgtggtcaaagcaaaccattttctagctgatctggttgataag
gatttaacccaatatagtgttaagatgattccagaagtgaactctactaaattaaacaaa
gctattatgagtcaactggtcaaagttcatagacacaaagatttggggatgaagcttcct
gtttatgatggaagaagagctctttacacagctggaaaacttccatttatatcaaaagaa
ttcacagttacaataatggatgacttggattggattggcattacaaaggaaagggaattt
acagtgactattgagattgttgcacatgcgagtatgtgtcaattacgtgagcttttatct
ggaaaacaagttgagtctcctctagaggcactcaagattgttgaccttgttttaaaagaa
cttacagctcaaaggtacatatcagttgggagatttttctattctcctaatattacaaat
ccaaagtcaataggatgtggattacagtcatggagaggtttctaccagagtataaaacca
actcaaatgggattgtcactaaatattgacacattggctactacattcatagaaccactc
cctgtcatcgagtttgtagctcaaattttggggaaacaagtctacacaaagcaaatttct
gatgctgataggataaagataaagaaagctcttagaggtgtgaaagttgaagttacacat
agagggaatgtaagaaggaaatatcgcatctcaggggtgacatcacaaccaacaagggag
ctaatgtttcctgttgatgaggaaaggaatatgaaatcagttgttgattattttcgtgaa
gtttatggattcacaatacaacatccccacctgccttgccttcaagtagggaatcagaaa
aaagtaaattacatgcccatggaggcttgcaagatcgttgagggacaaagacgcacaaaa
ggactcaacaataagcagataacttctttgttaaaattttcatgccagaggcctaaggaa
caagaaaaggaaatcctacagacaatgcatcaaagttgctttaaggaagatccttaccta
aaggaatttggcatcaccattgacgacaaacttacatcagttgatgctcgagttcttcct
gccccatggttgaagtaccacgacagtggaaaacagaaggaagttttacctcaaatggga
caatggaacatgaaagataagaaagttataaatggaagcgttgttaattactgggcttgt
atcaacttctcaagaactgttccagatagtgctgctcaaagtttttgtcatcagttggtc
caaatgtgccaagaatctggcatggaatttaaaagtgacagtgtggttccagtctactct
gcaagaccagatcaggtcaaaaaggcattaaagcatgtgtatacagctactgtaaataaa
ctcggtggaaaagagttggaattgcttattgccattctccctgacaataatggcagcttg
tatggtgatgtgaagcggatatgtgaaacggatctcgggttgatttcacaatgttgtctt
acaaaatatgttctaaagatcagcaaacagtatctctcaaatgtctccctaaaaatcaat
gtcaagctgggtggaaggaatactgtgttattggatgctttaagatggaaggtccctctt
gttagtgatatcccaactataatttttggagctgatgtcactcatccagagtctggagag
gatagcaacccatcaattgctgcggttgttgcctcacaagactggccagaagttacaaaa
tatgcagggctagttagtgctcaacctcacaggcaagaacttatccaggacttgtataaa
acctggcaagatcctcaacgtggaaaagtcaacggaggcatgatcagggagcttttacta
tcttttgagaaggcaacagggaaaaaaccactgaggatcatattctacagggatggtgta
agtgatgggcagttctatcaggtcctactctatgagctcgatgcaattcgtaaggcttgt
gcttcccttgaaccaaattaccaacctccagtcaccttcattgttgtccaaaaacgccat
cacacacgcctctttccaaacaaccacaatgaccgaaaaagcaccgacaaaagtggcaac
atcttacctggtactgttgtggacacaaagatttgtcatccagttgagttcgacttctat
ctttgcagtcatgcaggaatccaaggaactagcaggccggctcattatcatgttctatgg
gatgagaacaatttcactgctgatgaaattcaatctttaacaaataatctttgttacacc
tatgcgaggtgcacacgatccgtctctgtagttccaccagcatattatgctcatctggct
gcatatcgagctcgtttctatatggaacctgaggttcaccatgaaaatggatctgcacac
agcatgtgcatggtaaaaagtgcgggtgttcgcccccttcctgcattgaaagataaggtg
aaaaaagtgatgttttattgttag
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