Lactuca sativa (garden lettuce): 111883846
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Entry
111883846 CDS
T05352
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111883846
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsv01001
]
111883846
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111883846
Enzymes [BR:
lsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111883846
Protein kinases [BR:
lsv01001
]
Serine/threonine kinases: Other
VPS15 family
111883846
Membrane trafficking [BR:
lsv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111883846
Autophagy
Autophagosome formation proteins
PI3K complex
111883846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
WD40
Pkinase
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
HEAT
Beta-prop_TEP1_2nd
EIF3I
WDR90_beta-prop_4th
Beta-prop_EML_2
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
HEAT_2
PK_Tyr_Ser-Thr
HEAT_EZ
Beta-prop_CAF1B_HIR1
Cohesin_HEAT
TCAD9
PEP5_VPS11_N
APH
Adaptin_N
Beta-prop_Vps41
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
111883846
NCBI-ProteinID:
XP_023735944
LinkDB
All DBs
Position
7:56784013..56790893
Genome browser
AA seq
1483 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSSYNLVLKEVLGRARFLKSIQCKHDEGLVLVKVYFKRG
DSIDLRDYERRLSQIREIFSRMENPHVWPFQFWLETDKAAYLLRQYFFNNLHDRLSTRPF
LSLVEKKWLAFQLLYAVKQSHDYGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDD
PSDFSFFFDTGGRRRCYLAPERFYEHGGEIQVSQDAPLRPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQFDPSQHLEKIPDSGIRKMILHMVQLDPDSRCSAESYLQTYAGVVLP
SYFSPFLHNLYSNLNPINPDSRVAMCQLSFPEILKQMLNNKSGEDTIGINNFSTNVVTNR
RLMDSKQNVSFPKIPSHTEDKKNSQNNQQFGIRSTKKLLRTISNVFERNHHPHTREITVS
DLNSFMSDYDNQSDTFGMPILPLPQDNISCEGMVLIASLLCSSIRNVKMPQLRRTAVLLL
KSCSSYIDDEDRLQRVLPYVIAMLSDPSAIVRSAALETLCDILPLVRDFPPSDAKIFPEY
ILPMLSMLPDDPEESVRICYASNISKLALTAYGFLIHSISLTEAGVLNDGQKPGVPGVAS
GRLQNQKNDAQLAQLRKSIAEVIQELVMGPKQTPNIRRALLQDIGNLCWFFGQRQSNDFL
LPILPAFLNDQDELLRSVFYRQIVYVCFFVGQRSVEEYLLPYLEQALVDQTEAVIVNALD
CLAILTKSGFLRKRVLLEMIEHAFPLLCYPSQWVRRSVVTFVSASSESLGAVDSYVFLVP
LIRPFLRRQPSSLASENALFSCLKPPVSRTVFYQILENNRSSDMLERQRKIWYNSSAQGK
QSDDVYNKGVRELEKMKMWSDRRPDFQDHKHVSNSIQSFGLGEIPGLPSFSRTGSGTVDI
LDPLFSDKLKFSGFMSPQISGANSLVGEKSSDGIPLYYFKYDNKRSPGSASSSAPESSSQ
LDGLDSIPSPSLVSSSIGITNSTPQFHRVVHELEDRESDQTVHLSNKFQDMGVSSTLKGG
NPIVENDTSPTEIPSLPSFSRTPGIPDSGWRPRGVLVAHLQEHRSAVNDIAVSTDHSFFV
TASDDSTVKVWDSRKLEKDISFRSRLTYCLEGSRALCATMLHGSAQVVVGSSDGTIHMFS
VDYVSRGLGTVVEKYSGIADVKRNGIGEGAILTLLNYSSHGDDGKMILYSTHNCGIHLSD
TRQNSNAWNTKVIPEEGYVSALVTSPCGNWFVSGSSRGVLTLWDLRFGIPVNSWQYSVPC
PVEDMCLFVPPQSTTLSTTVRPLVYVAAGCNEVSLWNAENGSCHQVLRVANNESDGEISD
MPWALGRASTSTSSKTNSKGDSRRNVNYKYRVDELNEPPARSPGIRSLLPLPGGDLLTGG
TDLKIRRWDHCSPDRSYCICGPSIKGVGNDEFYETKSSFGVQIVQEAKRRPLATRPTGKA
VLASAATDTGGCHRDSILSLASVKLNQRLLLSSSRDGTIKVWK
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaagatcgcgcgtacgacgcaagcttcggcgacggagtattacctccacgac
ttaccgtcttcgtacaatttggtgcttaaagaggtgttgggaagagcacggttcctgaaa
tccattcagtgtaagcatgacgaagggttggttttagtcaaggtttattttaagcgtggt
gactcgattgatcttcgggattatgaacgacgattgtctcagattcgtgagatctttagc
cgtatggagaatcctcacgtttggccatttcagttttggctggagactgataaagctgct
tacttattgagacaatatttcttcaataacctccatgatcgactcagtacacgccctttt
cttagccttgttgagaagaaatggttggcttttcagttgctttatgcagtgaaacagagt
cacgactatggagtttgtcatggtgatattaaatgtgagaatgttctggttacttcttgg
aactggctttaccttgctgattttgcatcatttaaaccaacctatatcccacatgatgat
ccctctgatttctcattcttctttgatactggaggaaggagacgatgctatcttgcacca
gagagattctatgagcatggaggtgagattcaagtttcacaagatgcacctttaaggcct
tcaatggacatctttgctgttgggtgtgtaattgctgaacttttccttgaaggtcaaccc
ctctttgaactatcacaactacttgcatatagaaggggtcaatttgatcctagtcaacat
ttggagaagattccagattcaggaatccgcaagatgattctccatatggttcaacttgat
cctgattcccgttgttctgctgaaagctatctccaaacctatgcaggtgttgttcttcca
agctacttctctccattcctccataacttatactccaatttgaatcccatcaatcctgat
tccagggtagcaatgtgccagctgtctttccctgaaatactcaaacagatgttaaacaac
aaatcaggcgaggacaccattggaataaacaacttctccacaaatgttgttacaaatcgc
cgattgatggattccaaacaaaatgtaagttttcccaaaataccctcacacacagaggac
aagaaaaactctcaaaacaaccaacaatttggcattcgatccaccaaaaagctactcaga
acaatctcaaatgtattcgaaagaaaccaccatccacacacccgagaaatcacagtaagt
gatctgaactctttcatgtccgattacgacaaccaatccgatactttcggaatgccgatt
ttacccctaccacaagacaacataagctgtgaaggcatggttctaatcgcctcactcctc
tgttcctctatccgcaatgtcaaaatgccacaactcagacgtacagctgtccttttacta
aaatcatgttcatcatacattgacgatgaagatcgattacaacgtgttcttccatatgta
atcgccatgctgtcagatccttctgcaattgtaagatcagcagctttggaaactttatgt
gacattttgcccttggtcagagatttccctccaagtgatgcaaaaatcttccctgaatat
attctcccaatgctttcaatgcttccagatgatcctgaagaaagtgtacgtatatgctac
gcgagtaacatttccaaacttgcccttactgcttatggattcttaatccactccataagc
ttaacagaagctggagttttgaacgatggacagaaacctggagtgccaggtgtcgcgtcc
ggaaggcttcagaatcagaaaaacgatgcacagctggcacagttgaggaaatcgatagct
gaagtgattcaagaacttgtaatgggacccaaacaaactcctaacataagacgcgcgttg
ttacaagacattgggaatctttgttggttttttggtcaaagacaaagcaatgacttttta
ttaccgattctacccgcgtttttgaatgatcaagatgagcttttgaggtcggttttttat
agacaaatagtttatgtttgtttctttgttggtcaacggagtgttgaggagtatctttta
ccttatcttgaacaagctttagttgaccagacagaagcagtgatagtcaacgcattggat
tgtttagctattttgaccaaaagtggctttttacgcaaaagggtattgcttgaaatgatt
gaacatgcgtttcctttgttgtgttatccgagtcaatgggtaagaaggtcagtggtgaca
tttgtttcagcaagtagcgagagtttaggtgctgttgactcctacgtgtttcttgtccca
cttattcgtccttttcttcgtagacaaccatcttctttagcttccgaaaacgcccttttc
tcgtgtttgaagccacccgtttcaagaactgtgttttaccaaatcttggagaacaacagg
agttcagatatgttggaaagacaaagaaagatttggtataattcatctgcacagggtaaa
caaagtgatgatgtgtacaataaaggtgttcgagaattggagaaaatgaaaatgtggtct
gatagaagacccgattttcaagatcataaacatgtttccaatagtatccaatcttttggg
cttggtgaaattccaggattgccctcgttttcgcgtactggttctggaacagttgatatt
ttggatcctttattttcagataaattgaagttttcagggtttatgtcacctcaaataagt
ggggcgaatagtttagtgggtgaaaaatcttcagatgggattcctttgtattatttcaaa
tacgataacaaaagatcacccggaagtgcttcttcatctgcacctgaatcatcatcacaa
ttagacggtttggattccattccgtctcccagccttgtctcgagctcaatcggaatcacc
aattccactccgcaattccaccgagttgtacacgagctggaagaccgggaatcggatcaa
accgtccacctcagcaacaaattccaagacatgggagtttccagcaccctaaaaggaggg
aatccaatcgtggaaaacgacacctctcctaccgaaataccaagtttaccctccttctca
cgaacccccggaatcccggattccggttggcgtcctcgcggtgtgttggtagcacatctc
caagaacatcgatctgccgtcaacgacatcgctgtttccacagaccatagcttttttgta
actgcatccgatgattccactgttaaagtttgggattctagaaagctggaaaaggacatt
tcattcagatcaagactaacttattgtctagaaggaagccgtgcactctgtgccacaatg
ctccatggatctgctcaagtagttgtcggatcatccgatggaacaatccacatgttctca
gtcgattacgtctcccgaggactcggaaccgttgtcgagaaatactccggaatcgcggat
gtcaaacggaatggaatcggagaaggtgcgattctaacactattaaactactcttcacat
ggcgatgatgggaaaatgattctttacagtactcacaactgtggaatccatttgtcggat
acgcgacagaattcaaacgcatggaatacgaaagtgattccagaagagggttatgtttct
gctcttgtgacaagtccatgtgggaattggtttgtttcagggtcttctagaggggttttg
actttatgggatttgagatttggtatacctgtgaactcatggcagtattctgttccatgt
cctgttgaagacatgtgtctttttgtccctcctcagagtaccacattgtcaactactgtt
aggccacttgtttatgttgctgcagggtgtaatgaagtttctctctggaatgcagaaaat
gggagttgtcatcaggtgttgagggttgcgaataatgagagtgatggtgagatttctgac
atgccttgggcattgggtagagcatctacatctacatctagtaagacaaattcaaaaggt
gattctagaaggaatgtgaattataagtatagagtagatgagttgaatgaacctcctgct
agatcacctggaatccgttcattgcttcctttacctggtggagatttattaactggtggg
accgacttaaaaattcgtcgatgggatcattgcagcccagatcgaagttattgcatttgt
ggtccatctattaagggagttgggaatgacgaattttatgaaacaaaatccagttttggg
gtgcaaattgtgcaggaggcaaagaggcgaccattggcaactaggccaactggaaaggcg
gttcttgcttctgccgccactgatacaggcggctgccaccgcgactccatcctttctctt
gcttctgttaaattgaaccagagactacttttatcaagcagcagagatggcacaatcaag
gtttggaagtag
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integrated database retrieval system
