Lactuca sativa (garden lettuce): 111883906
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Entry
111883906 CDS
T05352
Name
(RefSeq) heat stress transcription factor C-1 isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111883906
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
111883906
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Dynamitin
DUF5320
Ax_dynein_light
UPF0242
Motif
Other DBs
NCBI-GeneID:
111883906
NCBI-ProteinID:
XP_023736004
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Position
7:60420917..60422264
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AA seq
325 aa
AA seq
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MESNEVIAPFIMKTYQMVNDSSIDDLIRWGNSNNSFIVVDSLAFSQRLLPAYFKHNNFSS
FIRQLNTYGFRKVDPDRWEFASEWFLRGQVHLLKNIGRKRQVNSSRGKYSGNMRGDDEEE
EEEMVMEIARLKQEQKALEEELVGMNKRLEATERRPEQMMALLCKVAEDPEILSRMMLEK
VQRSKRLVDKKRQRRLLTPPTSLPSSSSFQISNSIKREEDYGCQRVGGDVVSSSEGYYSN
EQLWRSPPSPVSPSTVWLWNKDTRSAGDDGVCFPVVSEPMNGSNRYSNHTGGGGGNNVYF
GDGSTDPDVRPPPPPYPFSLLGGGF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggaatctaacgaagtaatcgcaccattcatcatgaaaacttatcagatggtcaacgat
tcttccatagatgatctaatccggtggggaaactccaacaacagcttcatcgtcgttgac
tctttagctttctcacaacgcctcttacctgcttactttaagcacaataatttctccagt
ttcattcgccaactcaatacttacggattcagaaaagtggatccggatcgatgggagttt
gcgagcgagtggtttttgagagggcaggtgcatttattgaagaacattgggaggaagagg
caagtgaacagtagtagggggaaatattcggggaatatgcgaggagatgatgaggaggaa
gaagaagagatggttatggagattgcgaggttaaaacaggagcagaaggcactagaagag
gagctcgttgggatgaacaagagacttgaggcgacggagcggcggccggagcaaatgatg
gcgttgctttgtaaagtcgctgaagatccagagattttatcacgtatgatgcttgagaag
gttcagcgatctaaacgactggtggataaaaagaggcaacgacgattactcactcctccg
acgtcgctgccgtcatcgtcgagtttccaaatatcaaattcgattaaacgcgaggaggat
tacggctgccagagggttggcggagacgtagtttcatcatcggaaggatattacagtaac
gagcagttatggagatcaccgccgtctcctgtttctccgtcgactgtttggctgtggaat
aaggacacccgtagcgccggcgatgacggtgtttgttttcccgtcgtatcagagcctatg
aacggaagtaacaggtactcaaaccatacgggtggtggtggtggtaataacgtttacttt
ggcgacggatcaacggatcccgacgttcgacctccaccaccgccgtatccattttccctc
ctcggcggcggtttttaa
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