Lactuca sativa (garden lettuce): 111884026
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Entry
111884026 CDS
T05352
Name
(RefSeq) upstream activation factor subunit spp27 isoform X1
KO
K15223
upstream activation factor subunit UAF30
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111884026
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
111884026
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
Motif
Other DBs
NCBI-GeneID:
111884026
NCBI-ProteinID:
XP_052625370
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Position
3:complement(147225525..147228302)
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AA seq
318 aa
AA seq
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MVSDSELVNRLREFLSTSDLNTTTTASVRRQLEQDFGIDLRDKKAFIREQVDLYLESQEQ
NEEDKEGNDEEEQVEVEETEDEEPSTGKNGGSRKKGSKKENTEVKKKGGGFTKLCTLSPQ
LQKFIGVPELARTEVVKQMWGYIREHDLQDPANRKNIRCDEALRELFEVDTIDMFQMNKA
LAKHIWPLNSDGASVSSTPKEKPKKKEREEDTEEPKRKEKKQKGSGGGGGGGGNSGILAP
IPLSEALVKFLGTGENALSRSDVVKRIWDYIKKNNLQDPSDKRRILCDENLKELFDVDTF
IGFGVSKLLATHFIKGER
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggtatcggactcggagctcgtcaatcggctacgggagttcttaagcacgtctgatctc
aacaccaccacaacagctagcgtacgccggcagctagagcaagattttggaatcgattta
agggataaaaaggcgtttattcgagaacaagttgatctttatctcgaaagtcaagaacag
aacgaagaagataaagaaggtaacgacgaggaagaacaagtcgaagttgaagaaacagaa
gatgaagaacccagcactggcaagaatggtggtagcagaaaaaaagggtcaaaaaaggag
aacacagaggttaagaaaaaaggaggtggatttaccaagttatgtactctttctccacag
cttcaaaaatttataggagttcctgaattagctcgaacagaggttgttaaacagatgtgg
ggttacattagagaacatgatttgcaagatcctgcaaatagaaaaaacatacgatgtgat
gaagcattacgtgagctttttgaagtggatacaattgacatgtttcagatgaataaggct
cttgcaaagcatatatggcctttaaattctgatggtgcttcagtgagttcaacaccgaag
gaaaaaccaaaaaagaaagaaagagaagaagatacagaggagccgaaaagaaaggagaag
aagcaaaagggtagtgggggtgggggtgggggtgggggtaattctggtattcttgctcca
attccactttcagaagctttagtcaaatttcttggaacaggagaaaacgcattgtcacgt
tccgatgttgttaaaagaatttgggactacattaaaaaaaataaccttcaggatccatcg
gacaagagaagaatcttatgtgatgagaatttgaaagagctttttgatgttgacactttc
attggatttggggtttctaaacttttagctactcatttcatcaagggcgagaggtga
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