Lactuca sativa (garden lettuce): 111884042
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Entry
111884042 CDS
T05352
Symbol
LOC111884042
Name
(RefSeq) protein transport protein SEC23 E
KO
K14006
protein transport protein SEC23
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111884042 (LOC111884042)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111884042 (LOC111884042)
Membrane trafficking [BR:
lsv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111884042 (LOC111884042)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
Vps36-NZF-N
ICAM_N
Motif
Other DBs
NCBI-GeneID:
111884042
NCBI-ProteinID:
XP_023736168
LinkDB
All DBs
Position
6:86881069..86886385
Genome browser
AA seq
775 aa
AA seq
DB search
MSTEMANTDPEGIDGVRMTWNAWPRTKVEASKCVIPFAASISPIRPHPHIPTNPYVPLRC
KTCSAVLNPFCRVDFSALIWICPFCFQRNHFPHHFSGISETNVPAELYPQYTTIEYAFPQ
SDLHHTIPPPVYVFVLDMCMIEEELAFARSALQQALEFLPENALVGFVSFGTQVQVHELG
YADMSKVYVFRGSKEMTKDQVLDQLGLGSGAGGRRVGGAPGQGFQKGVVQGGGFPNSGVS
RFLLPASEGAYIIHSLLEELETDQWPVAPGNRSLRCTGVALSVAAGLLGACMPGTGARIV
ALVGGPCTEGPGSIVSKDLSDPVRSHKDLDKDAAPYFRKAVQFYEELSKQMVSQGHVLDL
FASALDQVGVAEMKVVIERTGGLVVLAESFGHSVFKDSFRRVFEKGEESLGLSHNGELEI
NCSKDIKIQGIIGPCTSLEKKGPAVASTVIGQGNTTAWKLCGLDKNTCLTVFFDISSSDK
SDASGNVNPQLYIQTVTSYQSIDGQSKLRVTTITRRWLETSVLSEELIQGFDQEAAAVVM
ARLTSYKMEMEEAFDATRWLDRNLIRLCSKFGDYRKDDPSSFALNPSFSLFPQFMFNLRR
SQFVQVFNNSPDETAYFRMMLNRENITNGAVMIQPSLISYSFNSLPSPALLDVASISADR
ILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQAFAQLLQAPHDDAELIIRDRFPVPRLV
VCDQHGSQARFLLAKLNPSATYNNEGSPGMDVIFTDDVNLQVFFEHLQRLAVQSS
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggagatggcgaacaccgatcctgaaggaatcgacggtgttcgtatgacctgg
aacgcctggccacgcacaaaagtcgaagccagcaagtgcgtcatccctttcgccgcctcg
atctctccgatccggcctcacccacacatccctaccaatccttatgtgcctctccgatgc
aagacctgctccgccgtccttaaccctttctgccgcgtcgacttctctgccctcatctgg
atctgtcccttttgtttccaacgaaaccacttccctcatcacttctccggtatctccgaa
accaacgttcctgcagaactctaccctcaatacaccacaatcgaatacgcttttcctcaa
tccgatctccatcacacaattcctccacctgtatacgtattcgtgcttgatatgtgtatg
atcgaggaggaattggcgtttgcgagatcggcgttacaacaggcgcttgaattcttacca
gagaatgcattggtggggtttgtttcgtttgggacacaggttcaggttcatgagttaggg
tatgctgatatgtctaaggtttatgtatttcgaggatcaaaagagatgactaaagatcag
gttttggatcagctagggttaggtagtggtgctggtggccggagagttggtggcgcacca
gggcagggctttcagaagggggtagtacaaggtggggggtttccaaattccggggtttct
aggtttttgctgcctgcttccgaaggtgcatacatcatccattcgcttttggaagaatta
gagacagatcaatggcctgttgcaccaggtaatcgatcattaagatgcactggggttgca
ctaagtgttgcagctggattgctaggggcttgtatgcctggcactggtgctcgaattgta
gcattggttggtgggccatgcactgaaggccctggttcgattgtatcaaaagatctctct
gatcctgtgcgttcacataaagatcttgataaagatgcagcaccatattttaggaaggca
gttcaattttatgaggaactttcaaagcaaatggtcagccaaggtcatgtattggatctt
tttgcttctgcacttgaccaggttggagtagcagagatgaaagttgttattgaaagaact
ggtgggcttgttgttttagctgaaagttttggacattcggttttcaaggattcatttaga
cgtgtctttgagaagggtgaagaatctcttggtctttcccataatggagaacttgagatc
aactgttcaaaggatattaaaattcaagggatcattggaccttgcacatctttggagaag
aaaggtccagctgttgcaagcacagtgattggacaggggaataccacagcttggaagctg
tgtggactcgataaaaatacttgtttgactgttttttttgatatatcatcaagtgacaaa
tcagatgcttcaggaaatgtaaatccacagttgtacatacaaactgttacaagttaccag
agtattgatgggcaatcaaagctgcgagttaccaccattactagaagatggttagagact
tctgttctctcagaggaattgatacaaggttttgatcaagaggctgcagctgtggttatg
gctagattaacttcttataaaatggaaatggaggaagcatttgatgcaacaagatggcta
gatagaaacctgattcgcctctgttctaaattcggtgactacagaaaagatgatccatct
tcattcgccttaaaccctagtttttcattgttccctcaattcatgttcaatcttcgaaga
tcacaattcgttcaggtgtttaataatagccccgatgagactgcttattttcgcatgatg
ctaaacagagagaatataacaaatggagctgtgatgattcaaccttcattaatatcatat
tcatttaattcacttccttcacctgcattacttgatgtagcatccatttcagctgataga
attcttttgttagattcctattttagtgtagtcatttttcatggaatgacaatcgcccaa
tggaggaatttgggttaccaaaatcagccagaacaccaggcgtttgcacagttgttgcaa
gctccgcatgatgatgcggagttgataatacgtgatcggtttccggttccaaggttggtg
gtgtgtgatcaacatggttctcaggcgcgattcttgttggcaaagttgaatccttcggca
acatacaacaatgaagggtcgcctggaatggatgttattttcacggatgatgtaaacctt
caagtgtttttcgagcatctacaaaggcttgcagttcaatcttcttga
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