KEGG   Lactuca sativa (garden lettuce): 111884255
Entry
111884255         CDS       T05352                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03083  Polycomb repressive complex
lsv04120  Ubiquitin mediated proteolysis
lsv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111884255
   04120 Ubiquitin mediated proteolysis
    111884255
  09126 Chromosome
   03083 Polycomb repressive complex
    111884255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111884255
   04121 Ubiquitin system [BR:lsv04121]
    111884255
   03036 Chromosome and associated proteins [BR:lsv03036]
    111884255
Membrane trafficking [BR:lsv04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    111884255
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     111884255
   Cul7 complex
     111884255
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     111884255
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     111884255
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 111884255
NCBI-ProteinID: XP_023736337
LinkDB
Position
3:64196406..64197481
AA seq 157 aa
MATSSSKKIVLKCSDGETFEVDEAVAVESQTIKHMIEDNCAGSCIPVPNVTSKILSKVIV
YCKKHVDTPKTDDKTAEDDLRAFDAEFMNVDQGTLFDLILAANYLNIKGLLDLSCQTVAD
KMKGKTPEQIRELFNIKNDFSPEEEEEVRRENAWAFE
NT seq 474 nt   +upstreamnt  +downstreamnt
atggccacgtcgtcttcaaagaagatcgttctgaaatgttccgacggtgagacgttcgaa
gttgatgaggcggtggcggtggagtctcagacgatcaagcatatgatcgaagataactgc
gctggcagctgcatccctgtacccaacgtcacaagtaagatcctctcgaaggtgattgta
tactgtaagaagcacgtcgatacaccgaaaaccgacgataagacagccgaggatgatctg
agggcgtttgatgccgaattcatgaatgtcgatcaaggcactttgtttgatcttattctg
gctgctaactatctaaatatcaagggcttactggatctgtcctgtcaaactgttgctgac
aagatgaaaggcaagactcctgaacaaattcgcgagctcttcaacatcaagaacgatttc
agtccagaagaagaagaagaagttcgcagggagaatgcctgggcatttgagtaa

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