Lactuca sativa (garden lettuce): 111884315
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Entry
111884315 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111884315
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111884315
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111884315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_IFT122_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
111884315
NCBI-ProteinID:
XP_023736396
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All DBs
Position
3:complement(64481468..64484327)
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AA seq
478 aa
AA seq
DB search
MMKKRNIASVDTAVVDICRREVGHLSTRKFAHRLAASEDLVLRLDLVRKLEKHRGCVNTV
SFNGDGDILVSGSDDKRVILWDWETGSIKLSFNSGHNNNIFQAKIMPGTDERTIVTCAAD
GQVRHATILECGKVETKLLARHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGEATE
LFSCQPVHGRSFMQVVNLNAIAIDPRNPNLFMIAGSDEFTRLYDIRRYRSNSNSSSAFGQ
PVDHFCPKHLLGDENVGITGLAFSDQSELLVSYGEEFIYLFSKDMGWGSNVNSVLDVDRT
MESDSKPGPLQYKGHRNCMTVKGVNFFGPKCEYVVSGSDCGRMFIWRKKDTEVVRVMEAD
KQVVNCIQPHPHTSMLASSGIESDIKIWTPTALEKAPPPTNIEKSRPKMNTWMYQMVSPR
EMALQLLSMRSQQASPIENVSVNREGNMLEFILSFDANSSEEDDNEEGGPTSAHDYFY
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaaaggaacatagcgagcgtcgatacggcggtggttgatatatgtcgccgt
gaagtcggccatctttccaccagaaaattcgcccatcgtctcgctgcttccgaggatcta
gtcctgagacttgatcttgtaagaaagctggaaaaacacagaggatgtgtgaacactgta
agcttcaatggagatggagacattctggtatctggttcagatgacaaaagagttatactc
tgggactgggaaaccggaagtattaaactttctttcaattctggccataataacaatatc
ttccaagcaaagatcatgccaggaaccgatgaacgaaccattgtcacttgtgctgctgat
ggccaggtgaggcatgcaaccatcttagaatgtggaaaagtggagacaaaattgcttgca
agacatcaaggaagagctcataagctagccattgaacctggaagtccacacatcttctat
acatgtggcgaagatggattggttcaacattttgatctgagaacaggagaggcaacagaa
cttttcagttgtcaaccagttcatggtagaagcttcatgcaagttgtaaacctaaatgct
atagcaatagacccacgaaaccctaatttattcatgattgctggatccgatgaattcact
agattatatgatatcagaagatacagatcgaattcgaattcttcatctgcttttggtcaa
ccagttgaccatttttgtcctaaacatttattaggagacgaaaatgttggaattaccgga
ttagccttctcggatcaaagcgaacttcttgtttcatacggtgaagagttcatctatctt
ttctcaaaggacatggggtggggtagtaatgtaaattcagtcttagatgttgatcggacg
atggaatctgattccaaaccgggcccgctacaatacaaggggcatcggaattgtatgaca
gtgaagggagtgaacttttttggacctaaatgtgagtatgttgtgagtggatcagattgt
gggagaatgtttatttggaggaaaaaagacacggaagttgttcgtgttatggaagctgat
aaacaagtggtgaattgtattcaaccgcatccacatacaagtatgcttgcgagtagtggg
attgagagtgacatcaagatttggacacctactgcacttgaaaaggcacctcccccaaca
aatattgagaagtcgaggcctaagatgaatacttggatgtatcaaatggtgtcaccgaga
gaaatggcacttcaattgctgtcaatgcgaagccaacaagcaagccccattgagaatgtg
agtgtgaatagagaaggtaatatgttggagtttattttgagttttgatgctaatagctcc
gaggaagatgataatgaagagggagggcccacaagtgctcatgactacttctattaa
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