KEGG   Lactuca sativa (garden lettuce): 111884319
Entry
111884319         CDS       T05352                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03083  Polycomb repressive complex
lsv04120  Ubiquitin mediated proteolysis
lsv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111884319
   04120 Ubiquitin mediated proteolysis
    111884319
  09126 Chromosome
   03083 Polycomb repressive complex
    111884319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111884319
   04121 Ubiquitin system [BR:lsv04121]
    111884319
   03036 Chromosome and associated proteins [BR:lsv03036]
    111884319
Membrane trafficking [BR:lsv04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    111884319
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     111884319
   Cul7 complex
     111884319
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     111884319
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     111884319
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB
Other DBs
NCBI-GeneID: 111884319
NCBI-ProteinID: XP_023736399
LinkDB
Position
3:64290747..64291954
AA seq 157 aa
MATSSSKKIVLKSSDGETFEVDEAVAVESQTIKHMIEDNCAGSSIPVPNVTSKILSKVIE
YCKKHVDTPKTDDKTAEDDLKAFDTEFVKVDQGTLFDLILAANYLNIKGLLDLTCQTVAD
MMKGKSPEEIRKIFHIKNDYTPEEEEEVRRENAWAFE
NT seq 474 nt   +upstreamnt  +downstreamnt
atggccacgtcgtcttcaaagaagatcgttctgaaaagttccgacggtgagacgttcgaa
gttgatgaggcggtggcggtggagtctcagacgatcaagcacatgatcgaagataactgc
gctggcagcagcatccctgtacccaacgtcacaagtaagatcctctcgaaggtgattgaa
tactgtaagaagcacgtcgatacaccgaaaaccgacgataagacagccgaggatgatctg
aaggcgtttgataccgaattcgtgaaagtcgatcagggcactttgtttgatcttattctg
gctgccaactatttaaacatcaagggcttactggatctgacctgtcaaactgttgctgac
atgatgaaaggcaagtctcctgaagaaatacgcaagatcttccacatcaagaacgattac
actccagaagaagaagaagaagtccgcagggagaatgcctgggcttttgagtaa

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