Lactuca sativa (garden lettuce): 111884361
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Entry
111884361 CDS
T05352
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsv04812
]
111884361
Cytoskeleton proteins [BR:
lsv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
111884361
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
ANAPC4_WD40
NBCH_WD40
eIF2A
PROPPIN
Motif
Other DBs
NCBI-GeneID:
111884361
NCBI-ProteinID:
XP_023736435
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Position
3:49272514..49278612
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AA seq
798 aa
AA seq
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MATTKRAYKLQEFVAHTSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHS
SGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNSVKLWDLTAGKLLH
DFKFHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETLELIGSAGPETSGVRCMTFNPDG
RTLLCGLHESLKVFSWEPIRTHDAVDVGWSKLSDLNMHEGKLLGCSYNQSCVGVWVVDVS
RIEPYSISKINGQQEQSGNLSILSDNTSKSSLNRLSISQSSDSMKEPKSLGRLSVSQNSE
QTNKDSKTFSSTGNAPAISQKMYPNVVQKISPPASVTVPSAPATSKRSVTKNQSTQNVST
FNRLDVAPVIVPRNNSRSEQSGELRREGISGRLMPTMVLSKTSDSRKFSNAKDEGEKPLA
SGHSVSDLSDTESSRVADRSGFTSMKESGFGNPAKETSFEDDRSSVSGKAEQNVVTESLP
SYQPEIYEGRLQRPHRDNYSMESKRRGRTRTLVSTWDRKERAPYHDTLPSRSLSDSVSVS
VSAVNTLPNPVKQLSESSAKEAEPLTEEDAIVDIMGRHDQFVSSMQSRLAKLQMIHRCWD
RNDIKAAIRAMERMADHSVTADIVSLLTEKMDTITLDICSCLLPLLTNLLESDMDKHQGL
SLELLLKLVRTFGSLIYSSLQASASVGVDIEAEQRLERCNLCYVELEKVKRCLPPLTRRG
GSIAKSAHELNLALQEVS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacaaagcgtgcttataagctacaggaatttgtagctcatacttcgagtgtg
aattgcctcaagattggtaggaaatcttcaagagttcttgttactggaggagaagatcac
aaagttaatctatgggctattggcaaaccaaatgccatactgagtttgtctggacattca
agtggaattgattctgtcagctttgattcgtctgaagtgttagtagctgctggagcagca
agtggtacaattaagttgtgggatttagaagaggcaaaaattgttcgcactcttactggt
catcgatcaaattgcatatccttggatttccatccatttggggagttttttgcttctgga
tctttggacacaaatctaaaaatatgggacataagaagaaaagggtgtatacatacctac
aaaggtcacacacgtggggtcaatgcaataagatttacaccagatggtcgttgggtggta
tctggtggagaagacaacagtgtaaagctatgggatttaactgctggaaagcttttacat
gatttcaagtttcatgaaggccaagttcaatgcatagattttcatccacatgagttcttg
cttgctacaggatctgctgataaaaccgttaaattctgggaccttgagactttggaactc
ataggttctgctggtccagagactagtggagtacgttgtatgacatttaatcctgatggg
agaaccctgctatgtggtttacatgagagtctaaaagtcttctcatgggaaccaatcaga
actcatgatgcagtagatgtaggatggtcaaaattgtcagatcttaatatgcatgaagga
aagcttctaggttgttcctacaatcaaagctgtgtaggagtttgggttgtagatgtctcg
agaattgaaccatatagcatttccaagataaatggtcagcaagaacaaagtggcaacctt
tcgattctgtccgataatacttcaaagtcaagtttgaacaggctttcaatttcacaaagt
tcagattcaatgaaggagccaaaatcattggggaggctttcagtttctcaaaactcagaa
caaacaaacaaagattccaaaaccttttcatctacgggaaatgcacctgctatttctcaa
aagatgtatccaaatgttgttcaaaagatcagtccacctgcttcagttactgttccaagt
gcacctgcaacttcaaaaagaagtgttacaaagaaccagtcaacacaaaatgtgtcaact
ttcaataggttagatgttgctcctgtaattgtgcctagaaacaacagtaggtcagaacag
agtggtgagttaagaagagagggtatttctggaagattaatgccaacaatggtactatcg
aaaacatctgattctagaaagttctcgaatgcaaaggatgaaggagagaagccattagct
tctggacattctgtgagtgatttaagtgacactgagtcaagtcgagttgctgatagaagt
ggttttacttcaatgaaagagtctggttttgggaatcctgcaaaggagacaagttttgaa
gatgacaggagttctgtttctggaaaggctgaacaaaatgtagtgacagaatcgcttccg
agttatcagcctgaaatctatgaaggacgcctacaacgaccacatagagataattattct
atggaaagcaaacgaagaggaagaacacgcacacttgtttctacttgggacagaaaagaa
agagcaccttatcatgacactcttccttccagaagcctctctgatagcgtctctgtctct
gtctctgctgtcaacacactgccaaatcctgtgaaacagttatctgaatctagtgcgaag
gaagcagaacctctcacagaggaggatgctattgtagatataatgggacgacatgatcaa
ttcgtatcttcaatgcagtctcgtctagccaaactacagatgatccatagatgctgggat
aggaatgatattaaagcagcaattagagcaatggagagaatggctgatcattctgtgact
gcagatatagtgagtcttttgacagaaaaaatggacaccatcacattggatatttgttct
tgtctactacctctcctcacaaacctccttgaaagcgacatggataagcatcaaggatta
tcactagaattgctgctaaagctggtgaggacatttggttcactcatatattcatcttta
caagcatcagcctctgttggtgttgatatagaagcagaacaaaggctggagcgttgcaac
ctctgttacgtggagcttgaaaaggtcaagcgttgcttgccgcctctaactagaaggggg
ggatcgattgccaagtcagcacacgagttgaatcttgcactacaagaagtgtcatga
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