Lactuca sativa (garden lettuce): 111884473
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Entry
111884473 CDS
T05352
Symbol
SPK1
Name
(RefSeq) guanyl-nucleotide exchange factor isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111884473 (SPK1)
Membrane trafficking [BR:
lsv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111884473 (SPK1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_DOCK9
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
111884473
NCBI-ProteinID:
XP_023736568
LinkDB
All DBs
Position
3:49191082..49200188
Genome browser
AA seq
1824 aa
AA seq
DB search
MATEKMSSNGHCFRRKPRQPVAANLDIDSLLDENLEQWPHLNELVQCYKTDWIKDENKYG
HYESVGSISFQNQIFEGPDTDIETEMHLANARQDKIEDITDDDVPSTSGRQLTEHYGESP
LPAYEPVFDWENERSIIFGQRIPESNMPQSSSGLKISVKVLSLSFQAGLVEPFYGTISLY
NKERREKLSEDFIFRVLPSEMQDASSSSESRGLFYLDAPSSSICLLIQLEKCATEEGGVT
PSVYSRKEPVHLTEREKQKLQVWSRMMPYREAFSWAIIPLFDSNIGSTSNGSASPSSPLA
HSLSGVNLQEGGVSEPIAKVTSDGQLGYSSGNSVVVEVSNLNKVKESYTEDSLQDPKRKV
HKPVKGVLRLEIEKLQAANTEYDNASESGSIANEVDHGGQLTDSTVNEWRNIHSNRHKEQ
TLNGSNSTGHADLTANDVQAFDFRTTIRNEPFLQLFHCLYVYPLTVSLSRKRNLFIRIEL
RKDDADARKQSLEAMYAREPGSTLQKWAHTQVAPGSRVACYHDEIKVSLPSMWTPQHHLL
FTFFHIDLQTKLEAPKPVIIGYAALPLSTHAQLRSEISLPIMKELVPHYLQDTGKERLDY
LEDGKNVFRLRLRLCSSLYPISERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDST
ALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDEAERNVYLVNYVDYA
FDDFGGRQTPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLSMAWFFLELIVKSMALEQTR
LLYNNLSLGEDIPPMQLKEGVFRCIMQLYDCLLTEVHERCKRGLSLAKRLNSSLAFFCYD
LLSTIEPRQVFELVSLYLDKFSGVCQSVLHECKLTFLQIICDHDLFVEMPGRDPSDRNYL
SSVLIQELFLTWDHDDLSQRAKAARILVVLLCKHDCDSRYQKPEDKLYIAQLYFPLVGQI
LDEMPVFYNLNAVEKREVLIVVLQILRNLDDASLVKAWQQNIARTRLFFKLLEECLTLFE
HRKSVDSLLIGGSSRSPVAEAPMSPKYSDRLSPAINQYLSEASRQEIRPQGASENGYLWQ
RVNSQLSSPSQPFSLREALAQAQSSRIGASTQALRESLHPVLRQKLELWEENLSAAISLQ
ILEITEKFSKAAASHSIATDYGKLDCMTSIFTSIFSRSQPLAFWKSLFPVFNNVFQLHGA
TLMARENDRFLKQIAFHLLRLAVFRNENIRKRAVIGLQILVRSSFSHFTQTARLRAMLTI
TLSELMSDVQVTQMKSDGTLEESGEARRLRKSLEEMADESKSGKSLTECGLPETSLVDIP
EKSTESKWSWSEVKFLSNSLLLALDASLEHALLGSLMNTDRYAAAESFYKLAMAFAPVPD
LHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVSRNDGVWSNNHVTALRKICPMV
STEITSETSAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCGSILELVIPVYKSR
RSYGQLAKCHSMLTNIYESILEQESSPIPFTDATYYRVGFYGDKFGKLDKKEYVYREPRD
VRLGDIMEKLSHIYELRMDGNHTLHIIPDSRQVKAEELQPGVCYLQITAVDPVMEDEDLG
SRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVVQTQGSFPALVNR
LLVTKSESLEFSPVENAIGMIETRTAALRNELEEPRSSDGDQLPRLQSLQRILQGSVAVQ
VNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGDEDQDFHT
QLVNGFQSLTAELSHYIPAILSEL
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atggccacagagaaaatgtcatctaatgggcactgttttagacgaaaaccacgccagcca
gttgctgcaaatttggacattgactcactgcttgatgaaaatttagagcaatggccacat
ctaaatgaacttgttcaatgctacaagactgattggattaaagatgaaaacaagtatggg
cactatgaaagtgttggcagtatatcctttcagaaccagatatttgaagggcctgatacc
gatattgaaacagaaatgcatcttgccaatgctaggcaagataagattgaagacatcact
gatgatgatgtacccagtacctctggtagacagcttacagagcactatggtgaatccccc
ttgcctgcttatgaacctgtatttgactgggaaaatgagaggtcaatcatatttggacaa
agaattccagaatctaatatgccacagtcttcaagtgggttgaagatttctgtaaaagtt
ctttccctgtcatttcaagcaggattagttgagccgttttatggcactatatcattgtat
aataaagagagaagagaaaagctctcagaggacttcatttttcgtgttctaccttctgaa
atgcaagatgccagcagttcctctgaatcgcgtggacttttctatttagatgccccgtca
tcatcaatctgtctgcttatacaattagaaaagtgtgctactgaagaaggcggagtgact
ccatctgtttattcacgaaaggaaccagtccatctgactgaaagagagaagcaaaaacta
caagtttggtctcggatgatgccttacagagaggctttctcatgggcaattatcccacta
tttgatagcaacattggttcaacatctaatggatctgcttctccaagtagcccacttgct
catagtctttcaggagttaatttgcaagagggtggtgtctctgagcctattgcaaaagtc
acatcagatggtcaactcggttactcaagtggaaattctgttgtggttgaagtttcaaac
ctaaataaagttaaagagagctatactgaagattctctccaggatcccaaaaggaaggtt
cataagcctgtgaaaggtgtcttaaggttggaaatagaaaaacttcaagctgctaacacc
gaatatgacaatgcttcagagagtggcagtatagccaatgaagttgaccatgggggtcaa
ctaactgattccacagtcaacgaatggcgcaacatacattcaaatagacataaggaacaa
accttaaacggatcaaactcaacaggacatgcagatttgactgctaatgatgttcaagct
tttgacttccgtacaacaataagaaacgagcctttcttgcagctttttcactgtctttat
gtctacccactgactgttagtttaagtcgaaaaaggaacttgttcatacgaattgagctt
agaaaagatgatgccgatgctcgaaaacagtcactagaggcaatgtatgcaagggagccg
gggtcgaccttacaaaagtgggcccacacacaagttgctcctggaagtagggtggcttgc
taccatgatgaaattaaagtttcactaccctcaatgtggaccccacaacatcaccttctg
ttcactttcttccatattgatcttcagacaaagttggaggctccaaagccagtaataatt
ggatatgctgctcttcctttatcaacacatgctcagttaagatctgaaatctctctacca
attatgaaagagttggtcccacactatcttcaagatactggcaaggagaggctggattac
ctggaagatgggaaaaatgtgttccgattaaggttacgcctttgttcatcattgtaccct
attagtgaacgtattcgcgatttcttccttgaatatgatagacatactcttcgtacaagc
ccaccttggggttctgaactccttgaggcaatcaacagtttgaaaaatgtcgactcaact
gctctgctacagtttcttcatccaatattgaatatgcttctacatcttattggcaatggt
ggagaaaccctccaggttgctgctttcagagctatggttaatattttgactagagtgcag
caagagtctgttgatgaagctgaaagaaatgtatatctggtgaactatgtggattatgct
ttcgatgattttggtggtagacaaactccagtgtatcctggtttgtcaacagtttgggga
agtttggctcgtagcaaggccaaaggctacagggtgggaccagtgtatgatgatgtgcta
tcaatggcttggtttttccttgaattgattgtgaagtcaatggcactagagcagactcga
ctgttgtacaacaatctatcactaggtgaagatatcccaccgatgcagttgaaagaaggt
gtgtttagatgcatcatgcagttatatgattgtcttctgaccgaggtgcatgaacgctgt
aaaagggggttaagtttagcaaaacgtttaaacagcagtttggctttcttttgttatgat
cttttgtcaaccattgagcctcgacaagtttttgaattggtatccttatacctggataag
ttctctggggtatgtcaatcagttttgcatgagtgcaagcttacgtttctacaaatcatt
tgtgatcatgacctgtttgttgaaatgcctgggagggatccttctgataggaactacctt
tcgtctgtattaattcaagaacttttccttacttgggatcatgatgatttatcccagcgt
gcaaaagctgcaaggattttggtagtccttttatgtaagcatgattgtgattctcgctac
cagaagcctgaagataaattgtatatagcccagctatattttcctcttgtgggacagata
ctggatgaaatgcctgtattttataacctgaatgctgttgaaaagcgtgaagtgttgatt
gttgttttgcaaatattacgtaatttggatgatgcatcacttgtaaaagcctggcagcaa
aatattgctcggacaagactatttttcaaattacttgaggaatgcctaactctttttgag
catagaaaaagtgttgatagcttgcttataggcggcagttcacggagcccagttgctgaa
gcacctatgtctccaaaatactctgataggctctcacctgccattaatcagtatctatcc
gaggcatctcgtcaagaaattcggccacaaggtgcatccgaaaatggatatttgtggcaa
agagtgaactcccagctcagctcccctagccaacccttctccttgagagaagctttggct
caagcacaatcctctagaattggagcttcaacacaagcactgagagaatcactgcatcca
gttttgaggcaaaaacttgaactttgggaagaaaacctcagtgctgctattagtctccaa
atactggaaataacagagaaattctccaaagctgcagcatcacatagcattgcaactgat
tatggaaagttggattgcatgacatccatattcaccagtatcttctcccgaagtcaacca
ctagcattctggaaatccctattcccagtattcaacaatgtgtttcagcttcatggggca
acactaatggcaagggaaaacgatcgtttcttaaagcaaattgctttccatcttctcagg
cttgcagttttccgtaatgaaaatatcagaaaaagagctgtcatagggttacagatcctt
gtcaggagctctttctcacacttcacacagacagcaagattgagggccatgcttacaatc
acattatcagaactcatgtctgatgtccaagtgactcaaatgaagtctgatggaaccctt
gaagaaagtggtgaagcacgccgtcttcgaaaatcactagaggaaatggcagatgaaagc
aaaagtggaaagtcactaaccgaatgcggccttccagaaacttcacttgttgacatcccc
gaaaagtcaacagaaagtaaatggtcatggtcagaggtgaagtttttatccaacagcctc
cttcttgctctcgatgctagtctggaacacgcacttctgggatcacttatgaacacagat
agatatgctgctgctgaaagcttctataagcttgcaatggcgtttgctccagtgccagat
cttcatataatgtggttattacatctttgtgatgcacatcaggagatgcaatcatgggct
gaagccgctcaatgtgcagttgctgttgctggtgttgttatgcaggctcttgtgagcaga
aacgatggagtttggagcaacaaccacgtgactgcactccgcaaaatctgtcctatggtg
agcacagagatcacatcagaaacctcagcagcagaagtggaaggatatggtgcatcaaaa
ctaacagtggattcagctgtgaaatacttacagctggcaaacaaacttttctcacaagct
gaactctatcacttctgtggaagcattctggaacttgtaattccagtttacaaaagcaga
agatcatacggacagctggcaaaatgccacagtatgctcacaaacatctacgagtcaatc
cttgaacaagaatcaagcccaatcccattcacagatgccacatattaccgagttggattt
tacggggataaattcggaaaacttgataaaaaagaatatgtctacagagagcctcgtgat
gttcggttaggtgacataatggaaaaacttagtcatatatacgagttgcgtatggatggt
aatcacactctgcatataatcccggattctagacaagtaaaagcagaagagttacagcct
ggcgtatgttatctccaaatcacagctgttgatccggtcatggaagatgaagatttagga
agcagaagggagaggattttttcactttctactggttctgttcgtgcgcgtgtttttgac
aggtttctgttcgatactccttttactaaaaatggtaagacacaaggtggattggaagat
cagtggaaaaggaggacagtggttcaaacacaaggttcttttcctgctttagtgaatcgg
cttttggttacgaaatcagagtctcttgagttttcaccagtggagaatgcgattggtatg
atcgaaacacgaactgctgctttgagaaatgaactggaagagcccaggagctctgatggt
gatcagcttccacgtctccagagtttacagaggatacttcagggatccgttgcagttcaa
gtgaacagtggtgtcttgagtgtgtgcacagctttcttatcgggtgagcctgcaacaaga
cttagatcgcaagagttgcagcaactgattgctgctcttcttgaattcatggctgtgtgt
aagagagctatacgagtgcattttagactaattggggatgaagatcaagatttccacaca
cagttggtcaatggctttcagtcactcacggctgagttgtcacattacatccctgcaatt
ctttccgagctctga
DBGET
integrated database retrieval system
